Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2215 ATGTTGAGCAGGACTGTGACTACCGTCGCAACGCGAACGCGCTTGAACTGGCAACGACAAGGTCCGGTCAAACCACCGACCCCCATCTCAGATGCCTTAGACCGCCACGTGTCCGTCACTCTGAAGCTGAAATGTCCTCCTCTCCCGGTAGTTGCCAGTTTCTACGAGGAGTGTATAATGGGTGAACACGTGGGGATTTTGAAAGTCATAGTTGTGCAAGGAAAAAGATTAGTGATTCGCGATTTCAAGAGTAGCGATCCTTATGTTGTGGTCAAGCTAGGAAATCAGACAGCAAAGACTAAGGTGATTAACAGCTGCTTGAACCCTGTTTGGAATGAAGAGCTGAGTTTCACTCTGACAGAACCTGTGGGAGTTCTAAATTTGGAAGTATTTGATAAGGACCTTTTGAAGAGTGATGACAAGATGGGAAATGCCTTCCTCAACCTTCAACCATTAGTCTCTGCAGCCAGAATAAGAGACATTTTACGGGTTTTCTCCGGTGAAACAACAATAAGGAAGCTTGTACCTGACAGCGAAAACTGCCTTGTTCGTGAAAGCAGTATCAATAGTGTTAATGGTGAGCTGGTGCAAAATGTTTGGTTACGGCTTTGGGGAGTCGAATCTGGTGAGCTAGAGTTGACGATCAAGTTCATAACTCCTGTCACTCCCTCTGTGTGA 678 0.4617 MLSRTVTTVATRTRLNWQRQGPVKPPTPISDALDRHVSVTLKLKCPPLPVVASFYEECIMGEHVGILKVIVVQGKRLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFTLTEPVGVLNLEVFDKDLLKSDDKMGNAFLNLQPLVSAARIRDILRVFSGETTIRKLVPDSENCLVRESSINSVNGELVQNVWLRLWGVESGELELTIKFITPVTPSV 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2215 225 CDD C2_ArfGAP 64 209 - -
Lele15g2215 225 ProSiteProfiles C2 domain profile. 45 162 IPR000008 -
Lele15g2215 225 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 63 219 IPR044562 -
Lele15g2215 225 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 63 218 IPR035892 -
Lele15g2215 225 SMART C2_3c 66 161 IPR000008 -
Lele15g2215 225 Pfam C2 domain 65 159 IPR000008 -
Lele15g2215 225 PRINTS C2 domain signature 81 93 IPR000008 -
Lele15g2215 225 PRINTS C2 domain signature 105 118 IPR000008 -
Lele15g2215 225 PRINTS C2 domain signature 126 134 IPR000008 -
Lele15g2215 225 Gene3D C2 domain 62 222 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2215 Lele-ChrLele15 18310083 18313781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2215 60 218 C2H2 Transcription Factor Family AT4G21160 42.767 6.30e-38 133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0226 13 9470978 9475214 Lele15g2215 15 18310083 18313781 hybridization