Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2185 ATGATTCCTAAGCAAATCCATGAGATTAAGGACTTTCTCCTCACTGCCCGGAGGAAAGATGCTAGGTCAGTGAAAATCAAGAGGAGTAGAGATGTTGTTAAGTTCAAGGTTCGATGTTCCAAGTACCTTTACACACTCTGTGTGTTTGACCCAGAGAAGGCTGACAAATTGAAGCAATCACTTCCTCCAGGTTTGAGCGTTCAAGACCTGTGA 213 0.4366 MIPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDL 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2185 70 FunFam 60S ribosomal protein L38 2 70 - -
Lele15g2185 70 Gene3D - 2 70 IPR038464 -
Lele15g2185 70 PANTHER 60S RIBOSOMAL PROTEIN L38 3 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
Lele15g2185 70 Pfam Ribosomal L38e protein family 3 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2185 Lele-ChrLele15 15761451 15762937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2185 2 70 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 92.754 5.93e-43 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0284 13 13796715 13798197 Lele15g2185 15 15761451 15762937 hybridization
Lele14g0252 14 13603149 13604539 Lele15g2185 15 15761451 15762937 hybridization