Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2172 ATGGAGCTTGAGTACCAGAAGCCTGCCGTGCTTGAGGAAGAAGATGGGTTCAGCAACGATTCTGCCATAACCCATTCTCCTTCTCCTTCTGCAAATGGGTTTGTTTATAAGGCCACAACAGGTAATCATATTCCTGAGGAAGCAAAGTCTCTCATCAACTTCAAAGCCATTAATAATGGTGGTGAATCTTTGCTTAGCTTTCAGCAGAAAGATTACTGTTTGTGGGAAAATAATAATGGTTTACGTCATCAGTGGAATCATCAGAATTCGGACCCAAGACTGATTCAGGATTTTAATTGCATTCAAACTTCAAGTGGCTATGGAGGATCAAAAGATATGCATCAGCAGCAGCAATGTGAGAGTTCGTATGGGTGGCTATATTCTGAACCAAGTGTTCCTTCTGATAATAACAGGCTTCAAGATTCTTCAACAAGATCAGCAAAAGAAGCATCCTTCAACAATAAGCGCCTTTCAATGGCAAACCCATCTAAGGATCCTCAAAGTATAGCAGCCAAGAACAGAAGAGAGAGGATAAGCGAGCGACTCAAGATACTTCAAGAACTAGTTCCTAATGGCCCCAAGGTTGATTTGGTGACCATGTTGGAGAAAGCCATTAGTTATGTCAAGTTTCTTCAACTGCAAGTCAAGGTACTGGCAACTGATGAATTTTGGCCGGTGCAAGGAGGAAAAGCGCCTGATATTTCTCGAGTAAAAGAAGCCATTGATGCCATTCTTTCATCTCAGAGCTCATCATCAACCTCAAAGCAACCAAAATGA 777 0.4183 MELEYQKPAVLEEEDGFSNDSAITHSPSPSANGFVYKATTGNHIPEEAKSLINFKAINNGGESLLSFQQKDYCLWENNNGLRHQWNHQNSDPRLIQDFNCIQTSSGYGGSKDMHQQQQCESSYGWLYSEPSVPSDNNRLQDSSTRSAKEASFNNKRLSMANPSKDPQSIAAKNRRERISERLKILQELVPNGPKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISRVKEAIDAILSSQSSSSTSKQPK 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2172 258 FunFam Transcription factor bHLH83 160 219 - -
Lele15g2172 258 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 211 IPR011598 GO:0046983
Lele15g2172 258 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 221 IPR036638 GO:0046983
Lele15g2172 258 MobiDBLite consensus disorder prediction 131 168 - -
Lele15g2172 258 CDD bHLH_AtIND_like 163 225 - -
Lele15g2172 258 SMART finulus 168 217 IPR011598 GO:0046983
Lele15g2172 258 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 48 250 - -
Lele15g2172 258 MobiDBLite consensus disorder prediction 131 170 - -
Lele15g2172 258 Gene3D - 160 219 IPR036638 GO:0046983
Lele15g2172 258 Pfam Helix-loop-helix DNA-binding domain 169 212 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2172 Lele-ChrLele15 15491823 15493134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2172 33 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 44.828 3.51e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele15g2172 HLH 5e-08 No_clan