Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2143 ATGGCTCAGCACGGCTCTGACCAACCTCGAGACGTTCCGAGCCACGTTGTACGAGCTCAGGGTTCAGGACTACGGGTTGCCTTTGATGTCCAACAACTGGCTAAAGATGGATCTGGGAAATACAAAACTGTAAGTGAAGCTATAAATGCAGCACCAAAGAGTGTTAGTGGGAGATATGTGATATACGTGAAGGCTGGAATTTACAACGAACAAGTAGAGATTAAGGCGAAGAATATAATGTTGGTTGGAGATGGTATTGGGAAGACTATCATCACGGGAAGCAGAAGTGTTGGAGGAGGCACTACAACCTTCCGATGCATCTTTGAAGGATACCAAGACACTTTATATGTTCACTCTGAGAGACAATTCTACAGAGAATGTGATATTTATGGCACTGTGGACTTCATCTTTGGCAATGCAGCAGTGGTTTTCCAGAACTGCAACATTTTTGCCAGAAACCCTCCAAACAAAGTGAACACGATCCCAGCTCAAGGTCGAACCAATCCGAACCAAAACACTGGAATTTCCGGTCACAATTATAGGGTTACAGCTGCTTCAGACTTGAAACCAGTTCAAGGCTCAGTGAAAACCTATTTTGGAAGGCCATGGAAGCAATATTCTCGAACTGTGTTTATGAAGACGAATCTAGATAGCTTGATAAACGAGGCAGGTTGGTTGGAAAGAAGTGGTAACTTTGCGTTGAACACTTTATATTGTGGAGAGTACATGAACACTGGTTCTGGTTCATCCACTGCAAATCGAGTTAAGTGGTCAGGTTATCACGTAATCCGCAGTGCTTCAGAAGCTTCAAAGTTCACTGTTGGAAACTTCATTGGAGGAAATTCATGGTTGCCAGCAACTCGTGTGCCTTTTACCTCTGCCTTATAA 888 0.4369 MAQHGSDQPRDVPSHVVRAQGSGLRVAFDVQQLAKDGSGKYKTVSEAINAAPKSVSGRYVIYVKAGIYNEQVEIKAKNIMLVGDGIGKTIITGSRSVGGGTTTFRCIFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVFQNCNIFARNPPNKVNTIPAQGRTNPNQNTGISGHNYRVTAASDLKPVQGSVKTYFGRPWKQYSRTVFMKTNLDSLINEAGWLERSGNFALNTLYCGEYMNTGSGSSTANRVKWSGYHVIRSASEASKFTVGNFIGGNSWLPATRVPFTSAL 295
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2143 295 Gene3D - 32 105 IPR012334 -
Lele15g2143 295 PANTHER PECTINESTERASE 33 105 - -
Lele15g2143 295 ProSitePatterns Pectinesterase signature 2. 129 138 IPR033131 -
Lele15g2143 295 Gene3D - 106 295 IPR012334 -
Lele15g2143 295 Pfam Pectinesterase 103 281 IPR000070 GO:0030599|GO:0042545
Lele15g2143 295 SUPERFAMILY Pectin lyase-like 34 292 IPR011050 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele15g2143 Lele-ChrLele15 14348305 14349859 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2143 29 295 Carbohydrate Esterase AT2G45220 61.290 3.14e-128 373