Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2142 ATGATATCTTTTCGCTTATTCATGTCTCTCGTACTTGTTCCCATCTTATACTCATCTTCTGCTACAAGTTATTCTACAGATGACATTAAATTATGGTGCAGCCAAACGCCAAATCCTCAACCATGTGAGTATTTCTTGAGCAACAACGTTAACCCAACTCATCAACTCAAAACCATCAAACACAAAGATGATTTTCTCAAGCTTTCACTTCAACTCGTTCAAGAGCGAGCCTTGATTGGCCATGCAAATACTGTTTCTCTAGAATCTACGTGTCGTAATGCTCATGAAAAAGCTGCATGGGCTGATTGCATTGAGCTTTATGAGCACACCATTCACAGACTCAACAAAACCCTAGACCCCATTGCCAAATGCTCCCAAGATGACGCTCAGACATGGCTCAGCACGGCTCTAACCAACCTCGAGACGTGCCGAGCCGGGTTCTACGAGCTCGGTGTTCAGGACTACGTGTTGCCTTTGATGTCCAACAACGTCACTAAGTTGTTGAGCAACACTTTGTCTCTGAACAAGGTTCAATACCAAGAAGAAGAAGCAAGTTACAAAGAAGGGTTTCCAACATGGGTGAAGCCTGGAGATAGGAAGTTGTTGCAGTCTTCTTCTTCATCGTCTTCTAGGGCTAACGTTGTTGTGGCTAAAGATGGATCTGGGAAATACAAAACTATAAATGAAGCTATAAATGCGGCACCAAAGAGTATCAGTGGGAGATACGTGATCCATGTGAAGGCTGGAGTTTACAACGAACAGGTAGAGATAAAGGCGAAGAATATAATGTTACTTGGAGATGGTATTGGGAAGACTATCATCACTGGAAGTAAAAGTGTTGGAGGAGGTTCCACCACCTTCCGTTCAGCCACCGTTGCTGTTGTTGGGGATGGATTTATTGCTCAAGGCATCGCATTTAGGAACACTGCCGGAGCTTCCAATCACCAAGCTGTTGCGCTACGTTCTGGTTCGGATTTATCGGTGTTTTACAGATGCAGCTTTGAAGGATACCAAGACACATTATATGTTCACTCTGAGCGACAATTCTACAGAGAATGTGACATTTACGGCACTGTGGACTTCATCTTTGGTAACGCAGCCGTAGTTTTCCAGAACTGTAACATTTTTGCCAGAAACCCTCCGAACAAAGTGAACACGGTAACGGCCCAAGGTCGAACCGATCTGAACCAAAACACCGGAATTTCCTTTCACAATTGTAGGGTCACAGCAGCTTCAGACTTGAAACCGGTTCAGGCCTCTGTGAAAACCTATCTTGGAAGGCCATGGCAACAATATTCAAGAACTGTTTTCATGAAGACTTTCTTGGATAGCTTGATAAACGAGGCAGGTTGGTTGGAATGGAGTGGTAACTTTGGGTTGAACACTTTATATTATGGAGAGTACATGAACACTGGTTCTGGTTCTTCAACAGCAAATCGTGTTAAGTGGTCAGGTTATCACGTAATCACAAGTTCCTCAGAAGCTTCAAAGTTCACCGTTGGAAACTTCATTGGAGGAAATTCATGGTTGCCAGCCACCAAAGTTCCTTTCACTTCTACCTTATAG 1566 0.4368 MISFRLFMSLVLVPILYSSSATSYSTDDIKLWCSQTPNPQPCEYFLSNNVNPTHQLKTIKHKDDFLKLSLQLVQERALIGHANTVSLESTCRNAHEKAAWADCIELYEHTIHRLNKTLDPIAKCSQDDAQTWLSTALTNLETCRAGFYELGVQDYVLPLMSNNVTKLLSNTLSLNKVQYQEEEASYKEGFPTWVKPGDRKLLQSSSSSSSRANVVVAKDGSGKYKTINEAINAAPKSISGRYVIHVKAGVYNEQVEIKAKNIMLLGDGIGKTIITGSKSVGGGSTTFRSATVAVVGDGFIAQGIAFRNTAGASNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVFQNCNIFARNPPNKVNTVTAQGRTDLNQNTGISFHNCRVTAASDLKPVQASVKTYLGRPWQQYSRTVFMKTFLDSLINEAGWLEWSGNFGLNTLYYGEYMNTGSGSSTANRVKWSGYHVITSSSEASKFTVGNFIGGNSWLPATKVPFTSTL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2142 521 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 177 IPR035513 -
Lele15g2142 521 SUPERFAMILY Pectin lyase-like 208 520 IPR011050 -
Lele15g2142 521 ProSitePatterns Pectinesterase signature 2. 355 364 IPR033131 -
Lele15g2142 521 CDD PMEI-like_3 31 176 - -
Lele15g2142 521 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 177 IPR035513 -
Lele15g2142 521 FunFam Pectinesterase 207 521 - -
Lele15g2142 521 Gene3D - 207 521 IPR012334 -
Lele15g2142 521 Pfam Plant invertase/pectin methylesterase inhibitor 28 174 IPR006501 GO:0004857
Lele15g2142 521 PANTHER PECTINESTERASE 9 513 - -
Lele15g2142 521 Pfam Pectinesterase 213 507 IPR000070 GO:0030599|GO:0042545
Lele15g2142 521 SMART PMEI_2 24 174 IPR006501 GO:0004857
Lele15g2142 521 TIGRFAM PME_inhib: pectinesterase inhibitor domain 3 176 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2142 Lele-ChrLele15 14343296 14345228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2142 1 521 Carbohydrate Esterase AT2G45220 66.475 0.0 721