Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2123 ATGGATGGGAATGGAGTAGAGAGGGACCTGGAGATAGAGGGTGGTGGGGTGGCGATGATCATGGCGAATGATTATGGCAAACAACAAGACAGGGAAGACAATACATCAGAATCAGAATCCTTTCTCCGAGAACCTTTGCTTCTCAAGAACAATAGGATGAACAACACCTCGCAACTTGCCATTGTTGGAGCCAATGTTTGCCCTATTGAAAGTCTTGATTACGAAATCATTGAAAATGATCTATTTAAACAAGATTGGAGGTCTAGAACGAAGGTCGAGATATGCCAATATATTGTTCTTAAATGGACTCTTGCACTTCTAATTGGTTTGAGTACAGGGCTTGTTGGTTCTTTTAATAACCTTGCTGTTGAGAACATTGCTGGTTTCAAGCTTCTACTCACTAACAGTCTCATGCTCAAAGAAAAGTATTATCTGGCCTTCACGGCATTTGCCGGTTGTAACATGATTTTGGCCACTGCTGCGGCCATCCTCTGTGCTTACATTGCCCCCGCAGCAGCTGGGTCTGGCATACCTGAGGTGAAGGCCTACCTCAATGGTATAGATGCCCATTCTATATTGGCTCCAAGTACCCTCTTTGTAAAGATCTTTGGTTCAATTTTTGGTGTTGCTGCGGGGTTTGTTGTTGGTAAGGAAGGACCTATGGTACATACTGGTGCTTGCATAGCCAATTTGCTGGGACAAGGGGGTTCTCAAAAGTATCGGCTGACATGGAAATGGCTCAGATTCTTTAAGAATGATCGAGATCGAAGGGATTTGATCACATGTGGTGCAGCTGCAGGGGTTGCTGCTGCCTTCCGTGCTCCGGTTGGTGGCGTCCTTTTTGCGCTTGAAGAAGCAGCTTCATGGTGGAGGAGTGCTCTTCTGTGGCGGACTTTCTTTACAACAGCAGTAGTAGCAGTAGTGCTGAGAGGTTTCATGGACTTGTGTCGCGGCGAAAACTGCGGTCTTTTTGGGGAAGGTGGGCTGATAATGTTTGATGTTAATGAAGCAAAGCCCGCGTACAGCAGCCCTGATCTGCTGGCAGTTGTATTTCTGGGTGTCGTTGGGGGCATTTTGGGAAGCCTTTACAATTACCTTGTGGACAAGGTCCTCCGCACTTATAGCATCATAAACGAGAGAGGCCCTATATTTAAAATTGTACTTGTGGTCATAATCTCCTTTTTGACATCTTGTTGCGCATATGGCCTTCCATGGCTATCAAACTGCATCCCTTGTCCTCCTAACTTGGGGGACCAGTGCCCCACCGTAGGTCGCTCCGGCCACTACAAAAATTTCCAATGTCCGCCTAACCATTACAATGATCTTGCTTCTCTTGTTTTCACTACTAATGATGATGCCATCCGCAACCTCTTTATAGCAGGCTCAGACAAGGAGTTTAATCTCTCTACACTTCTAATCTTCTTTGTTGCCATATACTTGCTTGGAATCATCACTTATGGAATTGCTGTCCCCTCTGGGCTATTTATTCCTGTCATACTTGCCGGGGCCTCGTATGGGCGCCTCGCTGGCAGTCTTTTAAGTCCATTCACCACACTCGATGTTGGATTGTTTGCCCTCCTTGGAGCCGCATCCTTCCTCGGTGGTACCATGAGAATGACTGTTTCTATTTGCGTCATACTCCTTGAACTCACGAATGACCTCCTTATGCTCCCATTGGTGATGCTGGTTCTTCTTGTTTCAAAGACTGTGGCTGATAGCTTCAACAAAGGTGTATATGATCAGATGGTGAAAATGAAGGGGCTGCCTTATATGGAAGCACATGCTGAACCATACATGAGGCATTTAGTTGCAAGTGATGTTGTCTCTGGCCCTCTGATAACTTTTTCTGGGATTGAAAAAGTGGGGAATGTCATCCATGCTTTAAGTATTACTAGGCACCACGGATTTCCCGTGATCGACGAGCCTCCTTTCTCCGCTGCTCCCGAGTTGTGTGGTTTGGTTTTAAGGTCACATCTGCTTGTGCTTCTTAAGAGGAAGAAGTTCACAAAGCAGAAGATGATGACTGGTTCTACCATTCTGAGAAACTTCAAAGCACGCGATTTTGCAAAGCCGGGGTTAGGCAAGGGCCTCAAGCTCGAGGATTTGGACATTTCAAAGGAGGAGATGGAAATGTATGTTGATCTCCATCCAATTACTAACACTTCACCGTATACAGTAGTTGAATCCATGTCCCTAGCAAAAGCTGCAGTTCTTTTCCGGGAGCTCGGCCTCAGGCATTTGTTGGTGGTGCCGAAGACACTGGCAAGACCTCCAATCGTTGGGATCTTGACAAGGCATGACTTCATGCCTGAGCACATTTTGGGACTATACCCTCATTTGGATCCACATAAGTAG 2355 0.4616 MDGNGVERDLEIEGGGVAMIMANDYGKQQDREDNTSESESFLREPLLLKNNRMNNTSQLAIVGANVCPIESLDYEIIENDLFKQDWRSRTKVEICQYIVLKWTLALLIGLSTGLVGSFNNLAVENIAGFKLLLTNSLMLKEKYYLAFTAFAGCNMILATAAAILCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSQKYRLTWKWLRFFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFMDLCRGENCGLFGEGGLIMFDVNEAKPAYSSPDLLAVVFLGVVGGILGSLYNYLVDKVLRTYSIINERGPIFKIVLVVIISFLTSCCAYGLPWLSNCIPCPPNLGDQCPTVGRSGHYKNFQCPPNHYNDLASLVFTTNDDAIRNLFIAGSDKEFNLSTLLIFFVAIYLLGIITYGIAVPSGLFIPVILAGASYGRLAGSLLSPFTTLDVGLFALLGAASFLGGTMRMTVSICVILLELTNDLLMLPLVMLVLLVSKTVADSFNKGVYDQMVKMKGLPYMEAHAEPYMRHLVASDVVSGPLITFSGIEKVGNVIHALSITRHHGFPVIDEPPFSAAPELCGLVLRSHLLVLLKRKKFTKQKMMTGSTILRNFKARDFAKPGLGKGLKLEDLDISKEEMEMYVDLHPITNTSPYTVVESMSLAKAAVLFRELGLRHLLVVPKTLARPPIVGILTRHDFMPEHILGLYPHLDPHK 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2123 784 ProSiteProfiles CBS domain profile. 718 782 IPR000644 -
Lele15g2123 784 SUPERFAMILY CBS-domain pair 595 769 IPR046342 -
Lele15g2123 784 Pfam CBS domain 720 768 IPR000644 -
Lele15g2123 784 Pfam Voltage gated chloride channel 158 572 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g2123 784 CDD CBS_pair_voltage-gated_CLC_euk_bac 604 771 - -
Lele15g2123 784 SMART cbs_1 611 664 IPR000644 -
Lele15g2123 784 SMART cbs_1 722 773 IPR000644 -
Lele15g2123 784 CDD ClC_6_like 70 591 - -
Lele15g2123 784 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 28 774 - -
Lele15g2123 784 Gene3D Clc chloride channel 93 589 - -
Lele15g2123 784 Gene3D - 590 775 IPR046342 -
Lele15g2123 784 FunFam Chloride channel ClC3 93 409 - -
Lele15g2123 784 SUPERFAMILY Clc chloride channel 79 593 IPR014743 -
Lele15g2123 784 PRINTS Chloride channel signature 201 220 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g2123 784 PRINTS Chloride channel signature 522 538 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g2123 784 PRINTS Chloride channel signature 578 592 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g2123 784 PRINTS Chloride channel signature 265 284 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g2123 784 PRINTS Chloride channel signature 540 559 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g2123 784 PRINTS Chloride channel signature 490 510 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g2123 784 PRINTS Chloride channel signature 170 187 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g2123 784 PRINTS Plant CLC chloride channel signature 300 310 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele15g2123 784 PRINTS Plant CLC chloride channel signature 442 458 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele15g2123 784 PRINTS Plant CLC chloride channel signature 286 294 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele15g2123 784 PRINTS Plant CLC chloride channel signature 318 325 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele15g2123 784 PRINTS Plant CLC chloride channel signature 75 83 IPR002251 GO:0005247|GO:0006821|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2123 Lele-ChrLele15 14081442 14087196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2123 4 784 Ion Channels AT5G49890 77.110 0.0 1190