Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2110 ATGGAACTTTCCAGTGAAGAAGGAGAGATCCCAATCCCAATAAACAGTGCCACTAGCTATGGAGGTGGAAATAATGGCCATGGCCACCTCATCCACCACCACCATGACCCTCTTCCAATCCACCACATCATCTCTAATTCCTCAGTCCTCCCAGTAGCATCAGTGCCGCCCCACAACAGCGTCGGAGTCATCGGAATCGGAGTAGCCGGAGGAGGAGGCGGCAGCGGCAGGGGGGACATGGAGGAGGAGGAGGATGACGATGATGATCAGCATCATGGTGGGCCCTACAACAACAGCAGCAGCAGCAAGAAACCAGTGGTGAAGTACAGAGAATGCTTGAAGAACCATGCAGCTTCCATGGGAGGGAATGCAACAGATGGTTGTGGAGAGTTCATGCCCAGTGGAGAAGAAGGAACCCTTGAAGCTCTCACTTGCTCAGCATGCCATTGCCACAGAAACTTCCACAGAAAAGAAGTTGAAGGCCACCATCTCCATGAACAACAAGATCCTTATCATCTTCATCAATATCATCATCATCTGCATCATCCTTACAGATTATCATCAGGTACCAGAAAGCTCCTTCTTCCTCCTCCGCCTGAAACCCTGGGCTACCCTACCCCACCGCCACCACCAGGTAACATCTTACCTTCTAGAATGATCATGCCCTACAATGTCATTGGGTCCCACCACTCAGACCTATCTGATGAGCAAGAAGATCATCATCATCATTATGGGATGATGAAGCCACATCATCATCATCATCAGAACAAGAAGAGGTTCAGAACGAAGTTCACACAGGAGCAGAAGGAGAAGATGCTGAGCTTTGCTGAGAGAGTTGGGTGGAAGATTCAGAAACAAGAAGAATCTGTTGTGCAACAGTTTTGTCAAGAGATTGGCGTGAAGCGGAGAGTTCTTAAGGTTTGGATGCACAACAACAAGAACAACCTCGCCAAAAAGAACATTAATCTCACAACAACTGACACAACTCCTCCTCCTCCTCCTCCTACTACTACTACTACTTCACCACCTTAA 1032 0.4845 MELSSEEGEIPIPINSATSYGGGNNGHGHLIHHHHDPLPIHHIISNSSVLPVASVPPHNSVGVIGIGVAGGGGGSGRGDMEEEEDDDDDQHHGGPYNNSSSSKKPVVKYRECLKNHAASMGGNATDGCGEFMPSGEEGTLEALTCSACHCHRNFHRKEVEGHHLHEQQDPYHLHQYHHHLHHPYRLSSGTRKLLLPPPPETLGYPTPPPPPGNILPSRMIMPYNVIGSHHSDLSDEQEDHHHHYGMMKPHHHHHQNKKRFRTKFTQEQKEKMLSFAERVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKNNLAKKNINLTTTDTTPPPPPPTTTTTSPP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2110 343 MobiDBLite consensus disorder prediction 1 33 - -
Lele15g2110 343 Gene3D - 246 319 - -
Lele15g2110 343 MobiDBLite consensus disorder prediction 64 105 - -
Lele15g2110 343 SUPERFAMILY Homeodomain-like 245 318 IPR009057 -
Lele15g2110 343 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 257 314 IPR006455 -
Lele15g2110 343 FunFam Zinc-finger homeodomain protein 2 245 318 - -
Lele15g2110 343 MobiDBLite consensus disorder prediction 318 343 - -
Lele15g2110 343 MobiDBLite consensus disorder prediction 327 343 - -
Lele15g2110 343 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 92 315 - -
Lele15g2110 343 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 109 158 IPR006456 -
Lele15g2110 343 Pfam ZF-HD protein dimerisation region 107 159 IPR006456 -
Lele15g2110 343 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 108 159 IPR006456 -
Lele15g2110 343 MobiDBLite consensus disorder prediction 231 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2110 Lele-ChrLele15 13917838 13918869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2110 103 327 ZF-HD Transcription Factor Family AT1G14440 55.217 1.15e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele15g2110 ZF-HD_dimer 4.4e-29 No_clan