Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2102 ATGTCAGAAATACGGGTTTCTGATCTCCACTTGAAGAAGGAGCTCACTCAAATTCGCAAAGCTGCTCGTGTATTGAGGGATCCTGGTACTACTTCTTCGTGGAAGTCGCCACTTAGTTCGTCGAGATCTGTCGCGGCTGCTTCTGCTTCTGCATGGAAGAACAATGGCAACTCTCAACTTCATTCTCAGTTGTCTCTTCCGAGTGGAAGCAACAATGGGAAGGACAAGATGGTGTTTTTATACAATTGGAAGAATTACAAATTGTCAAGTGAGAAACACAATGGCGATGATAAAGACGAAGAAGAAGAAGAGTTCGATGAAGATGGTGGTGGAAATGATGGGTCTTCGTCTCTTCTGGGGAGTTTCGAGGATAGCCTCAGTGATGCTCGCAATGGTTGCGATTCAAAGAGCGATACTTGCTTAGAGGTTGGTGGGAGTGCGATTCGTTCTTCCATTTTCAGGTGTAAAGATGCAAATCCTGTTGCGTTGGGCACGCCATCGACCAGAAGAGCTCTGGAGATTAAGAAAAAGAGTAAGAAAAGCAGAAATTCCCATTTGGATATTCTAAGAAAATATCAGCAAAGAGAAACCAATCTCGGTAAAGCTTTAGCGAATCCCAAGCATCATACTCATCGGTCAATAGCTTATAGCCGGGAGGACTCAGTTGGGCAGTCTGATGATACTGAAGATTACTGCAATTCGGAAGATTTAACACGAAACTCAGGGCCATCTCCTTTGCTTTTGAAGCTCAAGCATAAGAATTGGTCTCGCCCTAACTCTAAGTTATTGAAAAGTAATAGAAAAGAGGATTCTTCTTATAGTACTCCTGCAATGTCTACCAGTTCTTATAATAGGTATGGTCAACATAATCCTAGTACTGTTGGATCCTGGGATGGCACGACAACCTCAGTAAATGATGCTGATGATGAAGTAGATGATCTTTTGGATTTGCCTGGTCGCCAAGGATGCGGGATACCTTGCTATTGGTCAAAGAAGACTCCAAAACATAGAGGGACGTGTAGGAGTTGTTATTCACCTTCACTTTCTGACACTCTAAGGAGGAAAGGAAGTAGCATGCTTTGTGGAAGTCAAACTATCTATCCTAGACACCGGAGATCCTTGTCAAGCTCTCACAAGCGGAGAATTTCCTCAAGGAGTGCTCAAGGTGTTCTCCCATTGCTCACTAACAGTGATGATGTTAGAGGGTCATCTCTAGGAACTGGCATGAGCGATGATGAACTTTCTACAAACTATGGGGAGCTTGATCTTGAGGGTATAAGCAGGTTGGATGGAAGAAGGTGGTCCTCAAGTTGTAGGAGTCAAGAAGGATGGGAGATTGTAGCTTTCAATGGAGAAGGGGATGATGAAGGCACTCAAGAAAATAGTAGGAGTTTCAGTCAAAAGTATAAGCCTATGTTCTTTAGTGAATTGATTGGGCAGAATATTGTGGTCCAGTCACTTATAAATGCGGTTTCAAGAGGTCGAATTGCTCCCGTTTACCTTTTCCAAGGTCCACGCGGAACTGGTAAAACATCAATGGCCAGGATTTTTGCTGGTGCATTGAATTGTATAGCTCCTGATGAAACTAAACCTTGTGGCTACTGCAGGGAATGTACAAATTTCATTTCTGGGAAGAGCAGGGACCTTTTGGAAGTTGATGGAACCAATAAAAAAGGGATTGATAGAGTTAGACATCTATTGAGAAGATTATCAGTTAGGACTTCTTCAGCCTCCTCACGATACATGGTCTTTGTTATTGATGAGTGTCATTTGTTACCCTCTAAGACATGGTTGGCATTTCTTAAATCTCTGGAAGATCTACCTCAGCGAGTTGTTTTCATATTTATAACAACAGATCTTGACAATGTGCCCCGAACAATACAATCTAGATGCCAGAAGTACCTTTTTAACAAAATTAAAGATGCAGATATAGTAGCACGGCTAAGGAAAATATCCGCGGAGGAGAACCTGGATGTTGAGACAGATGCGTTGGATCTTATTGCTATTAATGCAGACGGCTCACTTCGGGATGCAGAAACTATGTTAGAACAGCTTAGTTTGCTGGGAAAAAGAATTACTACTAGTCTTGTCAACGAACTTATGGGGGTTGTTTCAGATGAAAAATTACTGGAACTTTTGGAGTTAGCAATGTCATCAGACACTGCAGAAACAGTGAAAAGGGCCAGGGAATTGATGGACTCTGGAGTTGATCCAATTGTTTTGATGTCCCAACTGGCAAGCCTCATCATGGACATCATCGCTGGATCATATACTGTCATAGATGACAAACCTGGGGATTCATTTTTTGGCGGACGAAGTTTGAATGAATCGGAGTTGGAGAGATTAAAGCATGCTTTGAAGCTTCTCTCAGAGGCTGAGAAACAGTTAAGGACTTCTAGTGAACGCTCAACATGGTTCACGGCTACTCTGTTACAGCTTGGTTCGATTCCTTCACCAGATATTACTCAGACCAGCAGCAGCAGGAGGCAGAGCAGCAAGACAACTGACGATGATCCATCAAGTGCTTCAAGAGAAGTAATTGCTCACAAGCATAAGCTAGATGTTCAGTGCAAACCTCGGAAATCAACATCACCTGTATCTCTGCAGAAAGCTGTAAATAGCAATCCCAGCCACCAAAGGAAGTTATCATCAAAGTTTGATGGTTTCAGCTTGAATTCAAAGCCATCAAATAGCCCAGTCATAGATGATGATGCCACGCCTGTTTCATTTGATGATCATACGGTTAGTAATGTGACATTTAGATGCATAGATTCAGGGAAGTTATGTGATATCTGGGCACGCTGTATTGGAAGGTGTCACTCAAAGACATTGAAGCAGCTGCTACATAATCATGGAAAACTCGTATCTATATGTGAAGTTGAAGGTCTGCTGGTTGCCTATGTTGCGTTTGGGGATGCAGATATTAAACTTAGGGTTGAAAGGTTTTTGAGCAGCATAACAAACTCCATGGAAATGGTTTTGAGACGAAATGTAGAGGTCAGAATTATCCACTTGCTTGATGGTGAAGGTGAAGATCAGATCAATTTATCAGGCCCAAAACAGGCAGAATCAGTAATAGCAAATGAGAAGGAACATAGAGAAGGTCATACAAGAGGAAGAGATACTTCCTCTGATTTTCCTCCTTTGCTGGATGGAAACTTTCAATCTACCAATGATTCGTCAGATTTACTGGTTGATGCAAATGGTACAAGAGAGAGACCAGATATTCCAATGCAAAGGATTGAATCCATTATTCGTGAGCAGAGGCTGGAAACTGCTTGGTTACAGGCTGTAGGAAAAGGCTCCCCAGGTTCATTAAGTCGCTTGAGACCTGAAAAGAATCAGGTCCTGCCTCAGGAAGGTATCTACTGTAAAGACCCAACAGAGTCCATGGACTCAACGAGGTTCTCCTCTCAGCATAGGGAAGATGACATCAGTAATGAAGTCGAAGTTTTGAAAGCTAACACTGGAAGGGTCCTACAGAAGGATCAGACTGGAATTGGAAGAATGGTCGAATGTTACTCCATGTCCCCTAGTTTATTGCATGACGGTAGTTTAGTAGCAACTTCCATCAGAGACAGTCTGGGATATGAATCAGGCCCAGGAGCAAGAGGTTGTAGTGGATTTTTGTGTTGGAACAACTCCAGGCGTAGAAGGGTAAAGGTAAAAGGTACCCCAGTGCGGAAAGTGGGACGCTTTCCATTGTTTGGTGAGTGTGGTAAGTCAAAGAGAAAGAGTTGA 3741 0.4274 MSEIRVSDLHLKKELTQIRKAARVLRDPGTTSSWKSPLSSSRSVAAASASAWKNNGNSQLHSQLSLPSGSNNGKDKMVFLYNWKNYKLSSEKHNGDDKDEEEEEFDEDGGGNDGSSSLLGSFEDSLSDARNGCDSKSDTCLEVGGSAIRSSIFRCKDANPVALGTPSTRRALEIKKKSKKSRNSHLDILRKYQQRETNLGKALANPKHHTHRSIAYSREDSVGQSDDTEDYCNSEDLTRNSGPSPLLLKLKHKNWSRPNSKLLKSNRKEDSSYSTPAMSTSSYNRYGQHNPSTVGSWDGTTTSVNDADDEVDDLLDLPGRQGCGIPCYWSKKTPKHRGTCRSCYSPSLSDTLRRKGSSMLCGSQTIYPRHRRSLSSSHKRRISSRSAQGVLPLLTNSDDVRGSSLGTGMSDDELSTNYGELDLEGISRLDGRRWSSSCRSQEGWEIVAFNGEGDDEGTQENSRSFSQKYKPMFFSELIGQNIVVQSLINAVSRGRIAPVYLFQGPRGTGKTSMARIFAGALNCIAPDETKPCGYCRECTNFISGKSRDLLEVDGTNKKGIDRVRHLLRRLSVRTSSASSRYMVFVIDECHLLPSKTWLAFLKSLEDLPQRVVFIFITTDLDNVPRTIQSRCQKYLFNKIKDADIVARLRKISAEENLDVETDALDLIAINADGSLRDAETMLEQLSLLGKRITTSLVNELMGVVSDEKLLELLELAMSSDTAETVKRARELMDSGVDPIVLMSQLASLIMDIIAGSYTVIDDKPGDSFFGGRSLNESELERLKHALKLLSEAEKQLRTSSERSTWFTATLLQLGSIPSPDITQTSSSRRQSSKTTDDDPSSASREVIAHKHKLDVQCKPRKSTSPVSLQKAVNSNPSHQRKLSSKFDGFSLNSKPSNSPVIDDDATPVSFDDHTVSNVTFRCIDSGKLCDIWARCIGRCHSKTLKQLLHNHGKLVSICEVEGLLVAYVAFGDADIKLRVERFLSSITNSMEMVLRRNVEVRIIHLLDGEGEDQINLSGPKQAESVIANEKEHREGHTRGRDTSSDFPPLLDGNFQSTNDSSDLLVDANGTRERPDIPMQRIESIIREQRLETAWLQAVGKGSPGSLSRLRPEKNQVLPQEGIYCKDPTESMDSTRFSSQHREDDISNEVEVLKANTGRVLQKDQTGIGRMVECYSMSPSLLHDGSLVATSIRDSLGYESGPGARGCSGFLCWNNSRRRRVKVKGTPVRKVGRFPLFGECGKSKRKS 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2102 1246 MobiDBLite consensus disorder prediction 269 300 - -
Lele15g2102 1246 Pfam DNA polymerase III, delta subunit 479 639 - -
Lele15g2102 1246 SUPERFAMILY post-AAA+ oligomerization domain-like 710 811 IPR008921 GO:0003677|GO:0006260
Lele15g2102 1246 Gene3D - 640 702 - -
Lele15g2102 1246 MobiDBLite consensus disorder prediction 258 300 - -
Lele15g2102 1246 CDD AAA 478 636 - -
Lele15g2102 1246 MobiDBLite consensus disorder prediction 1048 1065 - -
Lele15g2102 1246 MobiDBLite consensus disorder prediction 858 888 - -
Lele15g2102 1246 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 464 813 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Lele15g2102 1246 MobiDBLite consensus disorder prediction 831 845 - -
Lele15g2102 1246 MobiDBLite consensus disorder prediction 90 121 - -
Lele15g2102 1246 CDD HLD_clamp_pol_III_gamma_tau 639 702 IPR045085 -
Lele15g2102 1246 FunFam DNA polymerase III subunit gamma/tau 640 702 - -
Lele15g2102 1246 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 466 862 - -
Lele15g2102 1246 MobiDBLite consensus disorder prediction 860 888 - -
Lele15g2102 1246 SMART AAA_5 496 658 IPR003593 -
Lele15g2102 1246 Pfam DNA polymerase III subunits gamma and tau domain III 693 758 IPR022754 GO:0003887
Lele15g2102 1246 MobiDBLite consensus disorder prediction 204 245 - -
Lele15g2102 1246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 488 686 IPR027417 -
Lele15g2102 1246 MobiDBLite consensus disorder prediction 817 845 - -
Lele15g2102 1246 Coils Coil 775 802 - -
Lele15g2102 1246 MobiDBLite consensus disorder prediction 1124 1143 - -
Lele15g2102 1246 Gene3D - 455 637 IPR027417 -
Lele15g2102 1246 FunFam DNA polymerase III subunit gamma/tau 459 638 - -
Lele15g2102 1246 MobiDBLite consensus disorder prediction 1029 1070 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2102 Lele-ChrLele15 13744835 13752157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2102 460 762 Core DNA Replication Machinery Family AT1G21690 23.718 4.16e-15 76.3