Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2095 ATGGCAGTTGTAGCTACCTCTTCCTCATCTCCCACCATGAGCCACAGCCACGACGACACCGCCACAACCGCCGCCAATGATGGCTGCGATGGCACCACCCTCAAGGACGACGACAACGACAACAACAATAACATCGACGACAACCACCAGCACGACATGGTCATGCCCGGCTTCCGCTTCTACCCAACCGAAGAAGAACTCGTCGAGTTCTACCTTCGCCGGAAAGTCGAAGGCAAGCGTTTCAACGTCGAGCTCATCACCTTCCTCGATCTCTATCGCTACGACCCATGGGAGCTTCCTGCTATGGCGGCGATCGGAGAGAAGGAGTGGTACTTCTACGTGCCGAGAGATAGGAAGTATCGGAACGGTGATCGGCCGAACAGAGTGACGACGTCGGGGTATTGGAAGGCGACGGGAGCTGATAGAATGGTAAGAGCAGTGGAGAGTTCGAGGTCGATTGGGTTGAAGAAAACCCTAGTTTTCTATTCAGGGAAAGCTCCAAAAGGGATTCGAACCTGTTGGATTATGAATGAGTATCGCTTGCCTCACCATGAAACCCAGCGCTTGCAGAAGGCTGAGATATCTCTGTGTCGAGTGTATAAGAGACCTGGTGTAGAAGATCATCCCTCTCTTCCTCGTAGTCTCCCAACCAGACTCTCTACTTCATCATCATCAAGACCTTCTGCTTCTTCAGAGAAGAATCATCATTATCATAATAACAAGCACAACATCAACGTTAATGTTCCAGAAATGTTTGATCATCATCAAAACATGGGAACATTTCTTGAACAACAACCTCAGAATGATCATCATCATCATCAAGATCAGCAAATCACTAACGAAACTGACCAGGGAAGCAGTAGCAGCACCGCTGCTACCGCGGCCACCACTAACAACAACAACAACAATTCAATAGTAATGTTGGATGATCAGAATAGGCTAGTGAGTTATAATAATAGTAACCAACAATATTTACAATACTATGACAGTGGTATTATTAATCCTATTCCTTCTTCTGAAAATCATCATCTTCTTCCTCACCATCTTCATCATCATCATCATCTTCAGTTCTCTAATATGCTACTGCAGCAGCAGCCACAAGTTCATCAACAACCAATGGTGGCTATCAATACTTCTTTCTCTGCTGACAGATTGTGGGAGTGGAATCCATCATTAATCCCTGAAGCTACAAACCGAGAGTTCAGCAACATTTCCTTCAAGTAA 1224 0.4616 MAVVATSSSSPTMSHSHDDTATTAANDGCDGTTLKDDDNDNNNNIDDNHQHDMVMPGFRFYPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMVRAVESSRSIGLKKTLVFYSGKAPKGIRTCWIMNEYRLPHHETQRLQKAEISLCRVYKRPGVEDHPSLPRSLPTRLSTSSSSRPSASSEKNHHYHNNKHNINVNVPEMFDHHQNMGTFLEQQPQNDHHHHQDQQITNETDQGSSSSTAATAATTNNNNNNSIVMLDDQNRLVSYNNSNQQYLQYYDSGIINPIPSSENHHLLPHHLHHHHHLQFSNMLLQQQPQVHQQPMVAINTSFSADRLWEWNPSLIPEATNREFSNISFK 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2095 407 MobiDBLite consensus disorder prediction 205 241 - -
Lele15g2095 407 FunFam NAC domain-containing protein 35 63 205 - -
Lele15g2095 407 MobiDBLite consensus disorder prediction 31 47 - -
Lele15g2095 407 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 52 295 - -
Lele15g2095 407 SUPERFAMILY NAC domain 53 202 IPR036093 GO:0003677|GO:0006355
Lele15g2095 407 Gene3D NAC domain 63 205 IPR036093 GO:0003677|GO:0006355
Lele15g2095 407 ProSiteProfiles NAC domain profile. 54 202 IPR003441 GO:0003677|GO:0006355
Lele15g2095 407 MobiDBLite consensus disorder prediction 279 305 - -
Lele15g2095 407 MobiDBLite consensus disorder prediction 1 29 - -
Lele15g2095 407 MobiDBLite consensus disorder prediction 1 49 - -
Lele15g2095 407 MobiDBLite consensus disorder prediction 214 230 - -
Lele15g2095 407 MobiDBLite consensus disorder prediction 265 305 - -
Lele15g2095 407 Pfam No apical meristem (NAM) protein 56 181 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2095 Lele-ChrLele15 13667706 13671554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2095 1 407 NAC Transcription Factor Family AT2G02450 48.357 1.57e-114 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele15g2095 NAM 2.2e-34 No_clan