Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2091 ATGTCCCTCGTCATCAACATTGGCTTTGGCTACTCCATTGCTATCGCCCTCGCCTTCCTCGTTCTTGCCTCTACGCTCATTCTCTCTTTCTACCTCTGCTGCCGCAACCGTAACCGCATCCCCATTTCGAATTCGAACCCGAATCCAAATATGAATCCGGCATCTCCTCGGTCGAATGTGGAATCCGAGGGTATTATTCTGCCTCGGGTGATTTTTGTGGCGGAGGAGGAGGATGATAACGAGAGCGCCGTTGTGGGGCTCGACGAGAACGTTATAAACTCGTACCCGAGGTTGCAGTACAGTAGGGGTGCTATGGGTGTTGGAAGCAGTACGATGTGTTCGATCTGTTTATGTGAGTATAGGGATTCGGAGATGCTAAGGATGATGCCGGAGTGTCGCCATTATTTCCACCTCTTGTGCCTTGACTCTTGGCTTAAGCTAAATGGGTCGTGCCCTGTGTGCCGGAACTCGCCGCTCATGACGCCGATTTCGACGCCTCTGCAAGAAGTTGTGCCGCTCTCTCAGTACCCGGCTGATCGGAGGCGACGGAGAGATCTTCTAGATCCAGTTATTCATCTCTTTGATCACCAATTTGTCTTTTCAAATAAACGATTACTCCATATCTCCATGATTAGCTTTCCAGTTCTTATCACAGTTTCAGTTCTCATGCTGTGGCTCTATGAACATCTTTATCTTGAGCTGCAAATGCCAGGGTATATGAAATCATTCAATATCCTCAGTTCAGAAAATACAGGAATGCCAAAACTGAATGGTACTAATAAATTTGCAATATGGAGAAGGGCTTATGGCACAATCTTTATACTGGGTGCTCTTGCTCTTCTCTCTGTTGCTACCTTGTCTAAGTTCTTTATCTCTAAATCCTTTCTTGACAATGAATCTCTATGCAACCATTTGAATCCTGAGGAGTCGAAAGAAATTCGAAACACTGTGATTATGACGGCGCAAAATGTAATTCAGAGAATTCAACAAGAGCTGCAGAGCTTAAGAGATTCTGAGTCGGATACGGCTTCTGTGATGGAAATGAGTGCCTTTCTTGCTGATATTTTAGGACTCCTGGAATCCCTGGAGGCATCTATTTCAAATGATGAAAGGACTACTGGTCAGCATAAAATCGCTGCCACGACTTCTCATCCACTTTTGAAAGCGAAGAAACGGTCTGATGAGCTGGCTGATTACTTCCTCCGGGAGGAGATTCGCAAGTATGTGAAGATCAAGCCAAATAGGCTGAGAAAACAGAATTTCATGGGGGCGAATGGAACCTTCACAAGCATTGGCCATGCATGCTTCGCCATGAAGGAAGAGCTCGAGGAATACATGGATTATGACATTGGCGAAATCTGCAATGATGACTGGAAACTGGCTCAGAAGCTCATGGTTCATGGCTGTGATCCTCTCCCAAGAAGAAGATGCCTCGCCAGAGCGCCTCGGCTATATATGCAGCCATTCCCGATCAACGAGTCCCTCTGGAAACGCCCGGATGACAGAAACGTCCGGTGGAGTCAATACCGGTGCAAGAACTTTGCTTGCCTCGCCGGGAACACCACTCGCAAGGGATTCTTCAAATGCTCAGATTGCTTCAACCTCACTCATCATGAAATGCCCAGATGGGTAACATTGGATCCAGGTTCTGAAAATCAAACTTCTGATTTCCTCATTTCTGATGTTCTTCAAATCAAGCCGGGAGAAATCAGAATAGGATTGGATTTCAGTGTTGGAACTGGTACTTTTGCTGCTAGAATGAAAGAATACAATGTGACTATAGTTTCTGCAACTATCAACTTAGGAGCACCCTTCAATGAAATGATAGCCCTCAGAGGACTTATTCCTCTATACTTAACCATAAATCAACGGCTTCCATTCTTCGATAACACCCTCGATTTGATCCACACGACGAGGTTTCTAGACGGATGGATCGATTTCGTGCTGCTGGATTTCGTGCTGTATGATTGGGATAGAGTTCTGAGGCCAGGTGGGTTGTTGTGGATTGACAGCTTCTTCTGTTTGAAAGAGGATTTGGATGATTACTTGGAAGCTTTCAAGATGCTGAGGTACAAGAAACGTAAGTGGGTTGTTGTTCCAAAGATTGATAAAAGTGATGAAGAAGTGTTCTTTTCTGCCGTCTTAGAGAAGCCTCCAAGACCATTCTGA 2169 0.455 MSLVINIGFGYSIAIALAFLVLASTLILSFYLCCRNRNRIPISNSNPNPNMNPASPRSNVESEGIILPRVIFVAEEEDDNESAVVGLDENVINSYPRLQYSRGAMGVGSSTMCSICLCEYRDSEMLRMMPECRHYFHLLCLDSWLKLNGSCPVCRNSPLMTPISTPLQEVVPLSQYPADRRRRRDLLDPVIHLFDHQFVFSNKRLLHISMISFPVLITVSVLMLWLYEHLYLELQMPGYMKSFNILSSENTGMPKLNGTNKFAIWRRAYGTIFILGALALLSVATLSKFFISKSFLDNESLCNHLNPEESKEIRNTVIMTAQNVIQRIQQELQSLRDSESDTASVMEMSAFLADILGLLESLEASISNDERTTGQHKIAATTSHPLLKAKKRSDELADYFLREEIRKYVKIKPNRLRKQNFMGANGTFTSIGHACFAMKEELEEYMDYDIGEICNDDWKLAQKLMVHGCDPLPRRRCLARAPRLYMQPFPINESLWKRPDDRNVRWSQYRCKNFACLAGNTTRKGFFKCSDCFNLTHHEMPRWVTLDPGSENQTSDFLISDVLQIKPGEIRIGLDFSVGTGTFAARMKEYNVTIVSATINLGAPFNEMIALRGLIPLYLTINQRLPFFDNTLDLIHTTRFLDGWIDFVLLDFVLYDWDRVLRPGGLLWIDSFFCLKEDLDDYLEAFKMLRYKKRKWVVVPKIDKSDEEVFFSAVLEKPPRPF 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2091 722 Coils Coil 318 338 - -
Lele15g2091 722 SUPERFAMILY RING/U-box 112 159 - -
Lele15g2091 722 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 563 684 IPR004159 GO:0008168
Lele15g2091 722 Pfam Ring finger domain 112 155 IPR001841 -
Lele15g2091 722 Gene3D Vaccinia Virus protein VP39 532 711 IPR029063 -
Lele15g2091 722 SMART ring_2 113 154 IPR001841 -
Lele15g2091 722 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
Lele15g2091 722 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 159 IPR013083 -
Lele15g2091 722 CDD RING-H2_PA-TM-RING 113 155 - -
Lele15g2091 722 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 552 687 IPR029063 -
Lele15g2091 722 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 283 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2091 Lele-ChrLele15 13613474 13617357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2091 8 177 C3H Transcription Factor Family AT5G06490 36.313 1.06e-30 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0322 14 14808645 14809232 Lele15g2091 15 13613474 13617357 hybridization