Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2082 ATGGAAGATATTGCTACACAAGTGGCAACTCCTTTTTTCACACACCAATCTCTGCCTGCACAATTTTGTGAGTCATCTGCTATGGCAAAGAAGCGTGATCTATCATATGTTGCCTCCTCCACCTTTCTTCAGCAACAGTTTCAAAACCCTACGGACAACTGGAATCCAAAGGGATGGGAATGGGATGCTGTCAGATTCATTGCCAAACCGTTGGACACTAACAACCTTGAAGCTGGAGCTCCTGCAACCTCTATAAAAGACCAGCACACCAATTTCTACAACCACTCCGCTGTCGATGATGATGAGCATGAAGAAAGCCTTCGTTTGAAACTTGGTGGTCACCCAGCCTTCAATACAGCGCTGGAGCCCATGTCCTGCCCGAGCAAAAGGTTACGTTCTCACTCACCTGGTGGACCCTCTTACCCTATGTGTCAGGTAGATGACTGTGAGGAAGATCTATCCAATGCCAAAGACTATCACCGCCGACACAAAGTTTGTGAGGTTCACAGCAAATCTTCTAAAGCCTTCGTTGCTAACCAGTCACAACGGTTCTGCCAACAATGTAGCAGATTTCACCTGCTGTCAGAGTTCGACGAGGGGAAGAGAAGTTGTAGGCGTAGACTTGCTGGTCATAATCGTCGCAGAAGAAAAACTCAACCAGAAGATGTTACCCCCCAGCTCCTCGTAGCAAACCAGGATAATGCAACATCTAGGAATTTGGATATTGTCGACTTGTTGACTACAATTGCTGGTGCGCAAGGGACATTTGAGGAAGGAAGTAAAACTTGTTCACAACTTCCTCAGAAAGAGACGCTTGTTCACATTCTTGATAGGATAAATTCATTACCTTTGCAAGCTGACCTTGCTGCGAATTTGGCCAATGTTGGAAATTTATGTATGAGCAGTCTTGGGCAAACTTCTTCAAATCATAATGATAAATTGAACCAGAACAAATCTTCTCCATCAACTATGGACTTGCTTACTGTTCTTTCAGCAACTCTATCAGCATCTGCTCCTGATGCCATTGCTTTACACTCTAAAAAATGCAATCCTAGTAGTGACAGTGAGAAATCTGGGACAAGTGTTGATGACCAAACAACTGAGCGAAGTCTACGGAATGGGCAACCATTAGAATTTATTTCAATTGGTGCAGAAAAAAGTAGTGGCAGTTACCAGTCGCCTGTTGAGGATTCAGTCAGCCAGGTTCAAGAGACTCAAAAAAATTTACCATTGCAGCTTTTTAGCTCCTCTTTAGATGATGAAAGCCAGCCAAAAATGCCATCTCGAAAGTATCTCTCATCAGACAGTAGTAATCCTATTGAGGAGTCACCATCGTCTTCTCCCTCTTGGGTACAGAAGCAGTTTGCTTCGCAGAGTATAACTGAAGGTATCAAGTCAGACAAAATTTTAACTGGAAGAGTGACCAATGCACATAAGGAAGCCAGCCAAAGCAATAACTGTGATATTTCTCTTGATCTTTTTGGAGGATCAAATAACAGAGTTCAACCTAGCTCTGTGCCAAGTGTTCCAGTTCAAGCTGGGTACACATCTTCAGGATCTGATCATTCACCTCCTAGTTTGAATTCAGATGCTCAGGGACGTACTGGTCGAATCATGTTCAAACTTTTTGATAAGGATCCTAGTCATTTTCCAGGAACACTGCGAACTCAGATATACAATTGGCTTTCTAATAGCCCTTCAGAGATGGAGAGCTACATAAGACCTGGCTGTGTGATCCTTTCAGTCTATGTTTCAATGTCTTCTTCTGCCTGGGAGCAACTAGAAGAAAATTTTGTTCAACGTGTTCATTCTTTAATTCAAACTTCTGATTCTAAATTTTGGAGAAATGGGAGGTTTCTAGTTCGTGCTGGCAGTCAGTTAGCGTTATATAAAGATGGAAAGGTACGCTTAGGCAAAAGATGGAGAACATGGAGGTATCCGGAGTTGATATCTGTCTCCCCTTTGGCAATTGTTGGCGGCCAAGAAACATCAATTTCATTGAAGGGTAGAAATCTGTCAACTTCTGGAACCAAGATTCATTGCACAAGTAAAAGTTATTACACATCAAAGGAAGATGTAGGGTCTGTTTATTCGGGTATGATATATGATGAGATAAAATTGGGTGAATTTAAAGTGCACAATGCATCTCCTGGTGTTCTTGGTCGCTGTTTCATTGAGGTTGAGAATGGTTTCAAGGGTAACAGTTTTCCAGTTATAATAGCCGATGCAACTATTTGTAAGGAATTGTGGTTACTTGAGTCTGAGCTTGTTAACGAGGCAAACTTAAGTGATACAGTTGCTGAAGAGAACACTTGTGAATTTGCAAGGACTGGGTCAAGGGAAGAGGTTATGCAGTTTTTGAATGAGCTTGGCTGGCTATTCCAAAGGAAGAGATTCTCATATGCACAAGGGGTTCCAGTTTTTTCACTTGACAGGTTCAAATTTTTACTCACATTTTCTGTGGAAAGAAACTGTTCAATGTTAGTTAAAACCCTTATGGATATACTGGTTGAGGAACACTTGGAAGGGGAATGGCTGTCCAAGGGATCGGTGGAGATGCTGAATGCAATTCAACTCTTAAACCGGGCCGTGAAAAGAAGGCATATAAAAATGGTTGACTTGCTTATCCACTATTTCATACCTAGCAAAAACGACACATCCAGGAAATATGTATTTCCGCCGCATCTAGAGGGACCTGCTGGTATTACACCCTTACATTTGGCTGCTTGCACATCAGGTTCTGAGGGTATAGTTGACTCTTTGACAAATGATCCACAAGAGCTTGGATTGAAGTGCTGGGAGTCTCTTGCGGATGCAAATGGGCAAACTCCTTATGCCTATGCCTTGATGAGAAATAATCACTCTTATAACAGGCTGATTGCTCGTAAAATTGCTGGTAGAGAAAAATGCCAAGTTTCAGTAACAATTGAAACCGAGATAGAGCAACCGTCGGTCAGTATTCAGCATAAAACAAGGCCAAGCAACGAAGTGGGACAAGGTCAGAAGAGATCTTGTTCTAAGTGTGCAGTTGCAGCAATGTACTACAACAGGAGGGTTTTGCGCTCACAGGGACTGCTTCACCGCCCCTACATTCATTCGGTTCTCGCTATTGCTGCCGTTTGCGTATGCGTTTGTCTATTCTTCCGTGGAGCCCCTGACCTAGGTTCAGTTGCACCCTTCAAGTGGGAAAATTTGGATTATGGCACATTGTAA 3213 0.4276 MEDIATQVATPFFTHQSLPAQFCESSAMAKKRDLSYVASSTFLQQQFQNPTDNWNPKGWEWDAVRFIAKPLDTNNLEAGAPATSIKDQHTNFYNHSAVDDDEHEESLRLKLGGHPAFNTALEPMSCPSKRLRSHSPGGPSYPMCQVDDCEEDLSNAKDYHRRHKVCEVHSKSSKAFVANQSQRFCQQCSRFHLLSEFDEGKRSCRRRLAGHNRRRRKTQPEDVTPQLLVANQDNATSRNLDIVDLLTTIAGAQGTFEEGSKTCSQLPQKETLVHILDRINSLPLQADLAANLANVGNLCMSSLGQTSSNHNDKLNQNKSSPSTMDLLTVLSATLSASAPDAIALHSKKCNPSSDSEKSGTSVDDQTTERSLRNGQPLEFISIGAEKSSGSYQSPVEDSVSQVQETQKNLPLQLFSSSLDDESQPKMPSRKYLSSDSSNPIEESPSSSPSWVQKQFASQSITEGIKSDKILTGRVTNAHKEASQSNNCDISLDLFGGSNNRVQPSSVPSVPVQAGYTSSGSDHSPPSLNSDAQGRTGRIMFKLFDKDPSHFPGTLRTQIYNWLSNSPSEMESYIRPGCVILSVYVSMSSSAWEQLEENFVQRVHSLIQTSDSKFWRNGRFLVRAGSQLALYKDGKVRLGKRWRTWRYPELISVSPLAIVGGQETSISLKGRNLSTSGTKIHCTSKSYYTSKEDVGSVYSGMIYDEIKLGEFKVHNASPGVLGRCFIEVENGFKGNSFPVIIADATICKELWLLESELVNEANLSDTVAEENTCEFARTGSREEVMQFLNELGWLFQRKRFSYAQGVPVFSLDRFKFLLTFSVERNCSMLVKTLMDILVEEHLEGEWLSKGSVEMLNAIQLLNRAVKRRHIKMVDLLIHYFIPSKNDTSRKYVFPPHLEGPAGITPLHLAACTSGSEGIVDSLTNDPQELGLKCWESLADANGQTPYAYALMRNNHSYNRLIARKIAGREKCQVSVTIETEIEQPSVSIQHKTRPSNEVGQGQKRSCSKCAVAAMYYNRRVLRSQGLLHRPYIHSVLAIAAVCVCVCLFFRGAPDLGSVAPFKWENLDYGTL 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2082 1070 SUPERFAMILY Ankyrin repeat 858 962 IPR036770 -
Lele15g2082 1070 Gene3D - 135 205 IPR036893 GO:0003677|GO:0005634
Lele15g2082 1070 FunFam Squamosa promoter-binding-like protein 14 136 205 - -
Lele15g2082 1070 MobiDBLite consensus disorder prediction 385 454 - -
Lele15g2082 1070 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 94 857 IPR044817 GO:0003677
Lele15g2082 1070 ProSiteProfiles Zinc finger SBP-type profile. 141 218 IPR004333 GO:0003677
Lele15g2082 1070 Pfam SBP domain 144 217 IPR004333 GO:0003677
Lele15g2082 1070 SUPERFAMILY SBT domain 142 222 IPR036893 GO:0003677|GO:0005634
Lele15g2082 1070 MobiDBLite consensus disorder prediction 353 374 - -
Lele15g2082 1070 MobiDBLite consensus disorder prediction 500 531 - -
Lele15g2082 1070 MobiDBLite consensus disorder prediction 346 454 - -
Lele15g2082 1070 Gene3D - 825 974 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2082 Lele-ChrLele15 13467165 13472282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2082 1 1070 SBP-box Gene Family AT1G20980 50.693 0.0 957
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele15g2082 SBP 1.1e-28 No_clan