Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2075 ATGACCATACAACTGAGTCCTGAGAAGACGTTCATATTTATAGTGAATAATCCGACCCGCTGGGCGGTGTGGATTTCCATACGTACCACATATTTCGAAGACTACAAAACCCTAGCCTACTTCACTTTCCGCTCTCACTCCTCAACTCTCCTATGCGCATCACTTGAGCTTTCGGAAGAACGCCGGCACCATCTTGAATTAGGGGCGGTCCGTTTTTCTGCGAAGCCATGGCGCTGTTATGTAGAGAACGTTGTTGAAAAGAATAATGTGAAATCAGAAATCTCTATTCTTCATGCAGCCAAAACTAATAAAAATGCTTACAAGACTCTCATTGCCGCTGAGTACAGTGGTGTGGATGTTAAATTAGCCCCAAATTTTGAGTTTGGTGTTTCTAATAATACTCCTGAATTTATCAAGATGAATCCTATTGGCAAGGTGCCTGTGTTGGAAACACCAGATGGTCCAGTTTTTGAAAGTAATGCCATTGCTCGCTATGTTGCTAGATTGAAGGGTGACAATGCATTGTATGGATCTTCTCTAATGGACTATGCTCACATTGAACAGTGGATTGATTTTTCATCATTAGAGATTGATGCTAATATTCTCGCCTGGTTCAGACCAAGAATGGGAAGAGCCACTTACCTTCCTCCTGTTGAGGAAGCTGCAATTTCTGCACTAAAGAGAGCCTTGGGTGCATTGAACACCCACCTGGCTTCTAATACATATTTGGTCGGGCATTCTGTGACCCTAGCAGACATTATTTTGACATGCAATTTGTTTACCGGTTTCACTAAGCTCATGACCAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTCTGGACCTTGGTCAATCAACCCAAATTCCATAAGATCTTAGGTGATGTTAAGCAGACTGAAACTGTTATACCCATACAATCTGCACAGAAGCCCAAAGAAGCTAAGCCTAAGAAAGAAGCTCAACCAAAGAAAGAGGCTAAGAAAGAGGCGCCTAAAGAGGTTGAAAAGCCCAAAGAGGCTGAGGAGGAGGAGGCACCCAAGCCCAAACCCAAGAATCCTCTTGATCTTCTTCCCCCAAGTAAGATGATATTGGATGAGTGGAAAAGACTCTACTCAAACACCAAGACTAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGGACATGTATGACCCTGAGGGATACTCTCTCTGGTTCTGTGATTACAAATACAATGAGGAGAATACTGTTTCCTTTGTGACTATGAACAAGGTTGGTGGATTTCTTCAGAGGATGGATCTTGCTCGCAAATATGCATTTGGGAAAATGCTTGTGATTGGATCCGAGCCACCGTTTAAGGTGAAGGGGTTGTGGCTATTCCGTGGGCAAGAAATACCACAATTCGTCATTGATGAATGCTACGACATGGAACTCTACGAGTGGAGGAAGGTTGATATCTCAGATGAAGCTCAGAAGGAGCGTGTCAACCAGATGATTGAAGATTACGAGCCTTTTGAGGGTGAGCCTCTCTTGGACGCCAAGTGCTTCAAGTAA 1539 0.436 MTIQLSPEKTFIFIVNNPTRWAVWISIRTTYFEDYKTLAYFTFRSHSSTLLCASLELSEERRHHLELGAVRFSAKPWRCYVENVVEKNNVKSEISILHAAKTNKNAYKTLIAAEYSGVDVKLAPNFEFGVSNNTPEFIKMNPIGKVPVLETPDGPVFESNAIARYVARLKGDNALYGSSLMDYAHIEQWIDFSSLEIDANILAWFRPRMGRATYLPPVEEAAISALKRALGALNTHLASNTYLVGHSVTLADIILTCNLFTGFTKLMTKSFTSEFPHVERYFWTLVNQPKFHKILGDVKQTETVIPIQSAQKPKEAKPKKEAQPKKEAKKEAPKEVEKPKEAEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNEENTVSFVTMNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWRKVDISDEAQKERVNQMIEDYEPFEGEPLLDAKCFK 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2075 512 CDD GST_N_EF1Bgamma 97 169 - -
Lele15g2075 512 FunFam Elongation factor 1 gamma 172 308 - -
Lele15g2075 512 SFLD Main (cytGST) 97 282 - -
Lele15g2075 512 MobiDBLite consensus disorder prediction 306 359 - -
Lele15g2075 512 FunFam Elongation factor 1B gamma 93 166 - -
Lele15g2075 512 Gene3D Glutaredoxin 93 166 - -
Lele15g2075 512 FunFam Elongation factor 1-gamma 1 352 512 - -
Lele15g2075 512 Pfam Glutathione S-transferase, C-terminal domain 220 289 IPR004046 -
Lele15g2075 512 SUPERFAMILY Thioredoxin-like 94 177 IPR036249 -
Lele15g2075 512 Pfam Glutathione S-transferase, N-terminal domain 103 168 IPR004045 -
Lele15g2075 512 SUPERFAMILY eEF1-gamma domain 352 512 IPR036433 GO:0003746|GO:0006414
Lele15g2075 512 CDD GST_C_EF1Bgamma_like 182 304 - -
Lele15g2075 512 Pfam Elongation factor 1 gamma, conserved domain 351 459 IPR001662 GO:0003746|GO:0006414
Lele15g2075 512 SFLD Glutathione Transferase (cytosolic) 97 282 IPR040079 -
Lele15g2075 512 MobiDBLite consensus disorder prediction 313 352 - -
Lele15g2075 512 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 93 174 IPR004045 -
Lele15g2075 512 SMART EF1G_2 351 459 IPR001662 GO:0003746|GO:0006414
Lele15g2075 512 Gene3D - 172 309 - -
Lele15g2075 512 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 352 512 IPR001662 GO:0003746|GO:0006414
Lele15g2075 512 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 179 305 IPR010987 -
Lele15g2075 512 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 96 512 IPR044628 GO:0004364
Lele15g2075 512 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 352 512 IPR036433 GO:0003746|GO:0006414
Lele15g2075 512 SUPERFAMILY GST C-terminal domain-like 165 304 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2075 Lele-ChrLele15 13412915 13416853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2075 96 512 Eukaryotic Initiation Factors Gene Family AT1G57720 72.902 0.0 626