Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2064 ATGGCCAGAGTTTCCATACCTTTATCTCCCAAACGTGGGGAATGGGTGAAGGGGAAATCGGTAGGATCAGGATCTTTTGGGACTGTTCATTTAGCCATGAGCAAATCCACAGGAGGACTCTTTGTTGTTAAATCAGCACATACAAGGGCTGAATTTGCGACTTTAGAGAACGAGGTTGAAATTCTCAAGAATCTAGAACAATCTCCTTATATCGTACAATACTTAGGGTCAGAAAGGGATGGAGATGATCTCAGTGTTCTAATGGAGTACATGGCTGGGGGCAGTTTGGCTGATATTGCAGAGAAATTTGGTGGATCATTACAAGAAGATGTGGTTCGTTTGTATACACAAGAAATCCTTGAAGGCCTCAAGTATCTTCACGGTAATGGGATTGTGCACTGTGATCTTAAGTGCAAAAACGTGCTTGTGGGGTCTTCTGGGGACATCAAATTGGCAGATTTTGGATGTGCAAGGAGGGTGGATGACTTGAAAAATAAAGATTTGATGCAGAATAATGTTAGTGGAACCCCTCTCTGGATGGCTCCTGAAGTTTTGAGGAATGAAAAGCTCGATTTTGCTTCAGATATATGGTCTTTGGGATGCACTGTTATTGAAATGGCTACTGGTAGGCCTCCTTGGGGTGCTTCTAACTATGATTCAAACCCAATGGCTGTTATTTTGAAGATTGCCTGTGGTGATGAGATACCTAAATTCCCAACCCATTTCTCAAAGGATGGTCTGGATTTCTTGAGGAGGTGTTTGGAGAGAGACTCAAGAAAAAGGTGGACATGTGAGGAATTACTTAGGCACCCATTTGTGTCAAGGGATTATTCATCAGTAACTGTAACAACAACAACACCATCTTCACCCAAAGACACTGCTTCCTCACCAGTCAGTGTGTTGTTGGGGTTCTCAAGTTTTGATTATGCTTATGATTTTGTGGATGAACGAGAAAGTCCAGAGGAAAATGATTTCTCAGTCATAAATCCATTCGCATGTTGCAAAGATGGAAGAAAAGAGAGTGCAATGCTAAGAAATGGCGGTGAATGTGCATTTTGTTCATCACAGAATTGGATTACTGTCAGATCATGA 1092 0.4185 MARVSIPLSPKRGEWVKGKSVGSGSFGTVHLAMSKSTGGLFVVKSAHTRAEFATLENEVEILKNLEQSPYIVQYLGSERDGDDLSVLMEYMAGGSLADIAEKFGGSLQEDVVRLYTQEILEGLKYLHGNGIVHCDLKCKNVLVGSSGDIKLADFGCARRVDDLKNKDLMQNNVSGTPLWMAPEVLRNEKLDFASDIWSLGCTVIEMATGRPPWGASNYDSNPMAVILKIACGDEIPKFPTHFSKDGLDFLRRCLERDSRKRWTCEELLRHPFVSRDYSSVTVTTTTPSSPKDTASSPVSVLLGFSSFDYAYDFVDERESPEENDFSVINPFACCKDGRKESAMLRNGGECAFCSSQNWITVRS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2064 363 CDD STKc_MAPKKK 14 273 - -
Lele15g2064 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Lele15g2064 363 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lele15g2064 363 Pfam Protein kinase domain 16 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g2064 363 ProSiteProfiles Protein kinase domain profile. 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g2064 363 SMART serkin_6 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g2064 363 Gene3D Transferase(Phosphotransferase) domain 1 11 315 - -
Lele15g2064 363 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 15 299 - -
Lele15g2064 363 SUPERFAMILY Protein kinase-like (PK-like) 13 310 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2064 Lele-ChrLele15 13291747 13292838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2064 5 292 MAP Kinase Kinase Kinase AT5G55090 44.295 1.17e-72 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele15g2064 Pkinase 2.4e-66 CL0016