Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2056 ATGGACCCGCACAGCCCCATCCATTTCTACAGAATCATCTTGAAAACCAACCTTGAAACCATTATGATTCCAAGCAAATTTACAGGGAGATATGGAAGATGTTTGTCCAACCCAGTGTGTTTGAAGGCTGCTGATGGTAAAGAATGGAGAGTTTATTGGACAAAACGTGATAATGAGTTTTGGTTTCAAAAGGGATGGAAGGAATTTGTTAACTTTTACTCTCTAGATGAAGGTTATTTGGTTTTGTTCAAATATGAAGGAACTTCTCAGCTTGGTGTGCACATAATTGACAAGAGTTCCCTAGAAATAGAGTATCCTTTGTCTATGGACACCTCTAGTCAAGAGGACAACCTTGATAATCTCAGTGGTGATATAATTGAAAACTTGAAGGATGCCTGTCAAGAGAACAACCTTGATAATCTTAGTGATGATGTAATTGAAATCTCGGATGAGATGCCTCCGAGCCCTAAGGCTAGTCACAATACGCCCTTGTCAACTTCTAGGCCTCATAAGAAAATGAGAAGTACTACAGTTGAAGATGTTGAAATGAGAAGCTTCGATCTGCAGAATATGCCGGTGGGCAAGAAAACCAAAGGCGGGAAATTTCAAGGAAAAAAATTTCAGAAATCAACCAATGCAGGCTTGAAATTTTCTAAGGAGAAATCTGAAGGAACAAGAATTTTTAGGAATAGCAAATGTCTGAATTCTGAGCAAAGAAGGAAGAAAGGATTAACGGATGTGGAAAAGAATAAAGCTTTGGAGAGTGCCAGTTCTTTCAAATCCGACAATCCCTTTTTCATCATGGTCTTGCAGCCTTCATATGTCAGTTCTAATTCTTCCTTGCCAATGCCAAAAGAATTTGCTGGAAAACATTTTAAGGAAGAGTGTAGAGTTGTGCAACTTCAGACCTTGGATGGGAGAATTTGGCATGCTAAGTATAAGTTTCCCAAAATTGGAGAAGGCTGGAGGAAGTTTGTGAACGAAAATAATTTGAAAGTGGGGCATGTTTGTGTATTTGAAATGATTGATCGCTCATTCAAAGTGCATATTTTTAGAGATCATGAAAAAGGAAATCTGAAAGTAAACTCTTGTGAAAAGGAGCAGAAAAGCAGTATGCAAGATCCACCTCTTGAAAAGGCTACCTCTTCCCAATCTGAAAATCCTCATTTTATGCGTGGTTAACATCTTCGCAATAGTACTGGGAGTGTCACCCTTATCGTAAAAGATAAAGATTGGACTGTTGGGTTCGCATTCAGAAGTTACAATAAACAAGGTGCTGAATTTTCTTGGGGATGGAAGCAATTCTGTAAGGATAATGACTTGAAAGTAGGTGATGTTTGTGAATTTGAGCTCACTCAGAAATTCAAATTTCAAGTGACAATTTTCTCAGGTCGCCTCTAA 1401 0.3847 MDPHSPIHFYRIILKTNLETIMIPSKFTGRYGRCLSNPVCLKAADGKEWRVYWTKRDNEFWFQKGWKEFVNFYSLDEGYLVLFKYEGTSQLGVHIIDKSSLEIEYPLSMDTSSQEDNLDNLSGDIIENLKDACQENNLDNLSDDVIEISDEMPPSPKASHNTPLSTSRPHKKMRSTTVEDVEMRSFDLQNMPVGKKTKGGKFQGKKFQKSTNAGLKFSKEKSEGTRIFRNSKCLNSEQRRKKGLTDVEKNKALESASSFKSDNPFFIMVLQPSYVSSNSSLPMPKEFAGKHFKEECRVVQLQTLDGRIWHAKYKFPKIGEGWRKFVNENNLKVGHVCVFEMIDRSFKVHIFRDHEKGNLKVNSCEKEQKSSMQDPPLEKATSSQSENPHFMRGXHLRNSTGSVTLIVKDKDWTVGFAFRSYNKQGAEFSWGWKQFCKDNDLKVGDVCEFELTQKFKFQVTIFSGRL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2056 466 MobiDBLite consensus disorder prediction 362 393 - -
Lele15g2056 466 CDD B3_DNA 8 97 IPR003340 GO:0003677
Lele15g2056 466 Pfam B3 DNA binding domain 266 352 IPR003340 GO:0003677
Lele15g2056 466 Pfam B3 DNA binding domain 398 463 IPR003340 GO:0003677
Lele15g2056 466 Pfam B3 DNA binding domain 18 98 IPR003340 GO:0003677
Lele15g2056 466 MobiDBLite consensus disorder prediction 364 389 - -
Lele15g2056 466 Gene3D - 3 100 IPR015300 -
Lele15g2056 466 Gene3D - 376 465 IPR015300 -
Lele15g2056 466 MobiDBLite consensus disorder prediction 155 171 - -
Lele15g2056 466 MobiDBLite consensus disorder prediction 148 174 - -
Lele15g2056 466 CDD B3_DNA 388 463 IPR003340 GO:0003677
Lele15g2056 466 ProSiteProfiles B3 DNA-binding domain profile. 6 99 IPR003340 GO:0003677
Lele15g2056 466 SUPERFAMILY DNA-binding pseudobarrel domain 395 463 IPR015300 -
Lele15g2056 466 PANTHER B3 DOMAIN-CONTAINING 257 458 - -
Lele15g2056 466 SUPERFAMILY DNA-binding pseudobarrel domain 261 351 IPR015300 -
Lele15g2056 466 Gene3D - 244 356 IPR015300 -
Lele15g2056 466 SUPERFAMILY DNA-binding pseudobarrel domain 4 99 IPR015300 -
Lele15g2056 466 ProSiteProfiles B3 DNA-binding domain profile. 410 465 IPR003340 GO:0003677
Lele15g2056 466 SMART B3_2 377 465 IPR003340 GO:0003677
Lele15g2056 466 SMART B3_2 9 99 IPR003340 GO:0003677
Lele15g2056 466 SMART B3_2 266 355 IPR003340 GO:0003677
Lele15g2056 466 ProSiteProfiles B3 DNA-binding domain profile. 266 354 IPR003340 GO:0003677
Lele15g2056 466 CDD B3_DNA 264 352 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2056 Lele-ChrLele15 13232233 13236124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2056 395 462 B3 DNA Binding Superfamily AT3G18990 39.437 8.06e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele15g2056 B3 1.2e-16 CL0405