LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele15g2047	ATGAAGAACATATGTAAGGATGTGGATGGGTTGAAACCAACCATACTAATGGTGGTGGTTCAACTATTATTCGTTGTGGTTAACATTCTTTACAAACTCGTCGTCTATGATGGCATGAACTTGAGGATTGTGATCGTTTATCGTTTTGTTTTCGCCACCGCTTTCATGGCTCCTCTTGCTTTCATATTCGAAAGGAAGAAGAGGCCAAAGATGACGTGGACTATACTGTTTCAAGGACTTTTATGTGGCTTACTTGGAGGAACATTGGCACAAACAGTATACTTGGAGATGCTGGCCTTAACAACAGTAACGTTTGCATCAGCAATGAACAATCTCCTTCCAGCTGCTACCTTTGTTATGGCCCTCTTCTTCGGCTTTGAAAAATTGAACTGGAAAGCAGCAGCTGGGAAAGCCAAGATCATTGGAACCCTTGCAGGAACAAGTGGAGCCATGTTTCTAACATTCTACAAAGGTGCACGAATACCTATACACTCCTTTCACGTCACTCTTTTGCATCCACACAAGAGCCAAGTGGGCTCTTCCCACTCTTCCTCCGGTGGTAACACCGTCTTGGGTGCACTCTGTGGCTTGGGTTTCATTTCGTCTTTTGGTTTGTGGCTCATTGTTCAGGGTAAGATGAGTGCGAGATATCCATGTTATTACTCAAGCACGATGTTGATGAGTTTGTCAGCGTTAGTGTTTTCTACTGGCTTTGCTCTCTGCACTGAAAGGGATTGGAGTCAATGGAAATTGGGTTGGAACATAAGGCTCTTAACTGTTGTTTATGCGGGAGCAGTGGCATCAGGATTGAATGTGGTGATGATAGCATGGTGTGTACGCAAGGGAGGGCCTCTATTCGTATCAGTGTTTAATCCTCTGCAGCTTCTGTTCTTGGCTTTAGTTGGATCTTTCTTCATGGATGAGATTCTTCATCTTGGAAGTATAATTGGAGGAGTGCTGATAGTGTGTGGATTATATATGGTTTTATGGGGCAAAGGCAAAGAGATGGAGAAGATGAATCTTTTGGACGTACCTTCACAGACCCTCCACGTGTCATCCCCTTCAGTTGAAATCGTGGTCAAATCTTCCATTGACCACGACAAAAACAACCACAACAATAATATCAATACTTCAAACCTTGATAGGGATCATCAAGATTCGTCAGAAAATAATGGACATCAAGCAATACAAGATGGTGAAAAGACAAGTAGCATCTTACCTTAG	1224	0.4289	MKNICKDVDGLKPTILMVVVQLLFVVVNILYKLVVYDGMNLRIVIVYRFVFATAFMAPLAFIFERKKRPKMTWTILFQGLLCGLLGGTLAQTVYLEMLALTTVTFASAMNNLLPAATFVMALFFGFEKLNWKAAAGKAKIIGTLAGTSGAMFLTFYKGARIPIHSFHVTLLHPHKSQVGSSHSSSGGNTVLGALCGLGFISSFGLWLIVQGKMSARYPCYYSSTMLMSLSALVFSTGFALCTERDWSQWKLGWNIRLLTVVYAGAVASGLNVVMIAWCVRKGGPLFVSVFNPLQLLFLALVGSFFMDEILHLGSIIGGVLIVCGLYMVLWGKGKEMEKMNLLDVPSQTLHVSSPSVEIVVKSSIDHDKNNHNNNINTSNLDRDHQDSSENNGHQAIQDGEKTSSILP	407

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele15g2047	407	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	253	334	-	-
	Lele15g2047	407	MobiDBLite	consensus disorder prediction	390	407	-	-
	Lele15g2047	407	Pfam	EamA-like transporter family	14	141	IPR000620	GO:0016020
	Lele15g2047	407	Pfam	EamA-like transporter family	192	329	IPR000620	GO:0016020
	Lele15g2047	407	PANTHER	WAT1-RELATED PROTEIN	13	343	IPR030184	GO:0016020\|GO:0022857
	Lele15g2047	407	MobiDBLite	consensus disorder prediction	366	407	-	-
	Lele15g2047	407	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	47	142	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele15g2047	Lele-ChrLele15	13133970	13138598	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele15g2047	11	383	Nodulin-like Gene Family	AT1G25270	40.212	1.10e-90	276