Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2042 ATGACGATGACGATGACAACTGTGTGGAATGTGGTGGAGGGGTTGAAGCCGGCCATGTTAATGGTTGTGCTTCAGATAACATTTGCCGGCCTCAATGTGTTGTTTAAGCTTGTCGTCGACGATGGCATGAACCTTAGAGTCATCGTTGCCTACCGTTTTATCTTTGCCACTGTTTTCATTGGTCCTCTTGCTCTCATTGTTGAAAGGAACAAAAGACCAAAGATGACTTGGACCATACTCTTTCAGGCATTTCTATGTGGGTTATTTGGAGGATTAATAACACAAAACTTATACTTGGAAGCGTTGGCTTTAACTTCTGCAACATTTGTTTCGGCGATGGCCAATCTTACTCCAGCCGCCACCTTTATCTTGGCCGTCTGCTTCCGTTTGGAAAAACTGGATTTAGGAACAAAAGCAGGAAAAACCAACATCATAGGAACAATAATAGGGATAAGTGGGGCTATGATTATAACATTCTTCAAAGGCATAGAAATAAACACTGGCTCATTTCATATCACTCCCTTACATCACCATTATGGACACGTGGCATCACCACACTCCTCTTCCTTTGGTTGTAACACCCTCCTGGGTTTTCTTTGTGCTTTGGGAAGCTGCCTTACATATTCCTTGTGGCTCATCATTCAGACTAAGATGAGCAAGAGTTATCCATGTCATTACTCAAGCACAGCTTTGATGAGTTTGATGGGATCCCTCCTTTCCACTGCTTTCGCTATTTGCCTTGAGAGGGATTGGACCGAATGGAAGTTAGGCTGGAATGTTAGGCTTCTCACGGCTGCTTATTCAGGAATAGTGGTTTCTGGAGCAATGGTGGTGGTGATGGCATGGTGTATGCATAAGAGAGGCCCTCTTTATGTGTCTGCTTTCAGCCCTCTTTCGCTTGTCTTTGTGGCTCTCGCTGGCTCTTTCATGTTGGATGAGAAGCTCCACCTTGGAAGTATAATAGGAGGGGTGTTAATAGTGTGTGGATTGTATGTGGTTATATGGGGAAAAGACAAAGAGCTGAAGAATATGAATCAACTTGTTCCATCTTCATCTGATCAGAGCCTTCATGAAATCGCAGTGAGGTCTCCTGCAGAAGATAAACGTAGCCCTCATTAA 1119 0.4388 MTMTMTTVWNVVEGLKPAMLMVVLQITFAGLNVLFKLVVDDGMNLRVIVAYRFIFATVFIGPLALIVERNKRPKMTWTILFQAFLCGLFGGLITQNLYLEALALTSATFVSAMANLTPAATFILAVCFRLEKLDLGTKAGKTNIIGTIIGISGAMIITFFKGIEINTGSFHITPLHHHYGHVASPHSSSFGCNTLLGFLCALGSCLTYSLWLIIQTKMSKSYPCHYSSTALMSLMGSLLSTAFAICLERDWTEWKLGWNVRLLTAAYSGIVVSGAMVVVMAWCMHKRGPLYVSAFSPLSLVFVALAGSFMLDEKLHLGSIIGGVLIVCGLYVVIWGKDKELKNMNQLVPSSSDQSLHEIAVRSPAEDKRSPH 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2042 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 160 - -
Lele15g2042 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 338 - -
Lele15g2042 372 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020
Lele15g2042 372 Pfam EamA-like transporter family 17 158 IPR000620 GO:0016020
Lele15g2042 372 PANTHER WAT1-RELATED PROTEIN 16 341 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2042 Lele-ChrLele15 13063223 13068006 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2042 15 343 Nodulin-like Gene Family AT1G25270 47.576 4.36e-104 309