Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2019 ATGTCTCACAGGAAGTTTGAGCACCCAAGTCATGGTTCCCTTGGCTTTCTCCCCAGGAAGCGGGCTGCTCGTCATCGTGGAAAGGCAAAGGCTTTCCCAAAGGATGATCCCAGCAAACCTTGCAGATTGACTGCCTTTATGGGTTACAAGGCTGGGATGACCCACATCGTTAGAGAAGTTGAGAAACCTGGATCAAAGCTTCATAAGAAGGAGACTTGTGAGGCTGTTACCATTGTTGAAACTCCTCCAATGGTTGTTGTTGGAGTTGTTGGATACGTGAAGACACCTCGTGGACTACGCACGTTAAATACAGTCTGGGCTCAGCATCTAAGTGAGGAACTTAAAAGGAGGTTCTACAAGAACTGGTGCAAGTCTAAGAAGAAGGCATTTACCAAGTATTCAAAGAAACATGAAACTGAAGAAGGAAAGAAGGATATTCAAGCACAGCTTGAAAAATTGAAAATATATGCATCTGTCATCCGTGTTTTGGCCCATACTCAGATACGGAAGGTGAAGGGTCTAAAGCAAAAGAAGGCACATCTGATGGAGATCCAAGTTAATGGGGGGACAATAGCGCAGAAGGTGGACTATGCATATGGCTTCTTTGAGAAGCAAATCCCAGTGGATGCTGTTTTCCAGAAACATGAGATGATAGATATCATTGTTGCCAGGGCCGGACAAAATGGATACCATCACCGTACTGAGTTGAATAAGAAGGTCTACAGGGTTGCAAGGCAGGTGTTGAATAGCTTGATGACTGAGAAGGACATTACTCCAATGGGTGGATTCCCTCACTATGGTGTGGTAAAGGATGATTATATTATGATTAGGGGTTGCTGTGTGGGACCCAAGAAGCGGGTGCTGACCCTTCGTCAGTCATTACTGAAGCAGACTTCTCGTGTGGCCCTTGAGGAGATCAAGCTCAAGTTCATTGACACTTCCTCCAAGTTTGGACATGGTCGCTTCCAGACCACTCAGGAGAAACAGAAGTTTTTTGGTCGCCTGAAGGCCTGA 1014 0.4576 MSHRKFEHPSHGSLGFLPRKRAARHRGKAKAFPKDDPSKPCRLTAFMGYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYKNWCKSKKKAFTKYSKKHETEEGKKDIQAQLEKLKIYASVIRVLAHTQIRKVKGLKQKKAHLMEIQVNGGTIAQKVDYAYGFFEKQIPVDAVFQKHEMIDIIVARAGQNGYHHRTELNKKVYRVARQVLNSLMTEKDITPMGGFPHYGVVKDDYIMIRGCCVGPKKRVLTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2019 337 Gene3D Translation factors 210 318 - -
Lele15g2019 337 SUPERFAMILY Translation proteins 4 318 IPR009000 -
Lele15g2019 337 FunFam 60S ribosomal protein L3 83 207 - -
Lele15g2019 337 Pfam Ribosomal protein L3 222 318 IPR000597 GO:0003735|GO:0005840|GO:0006412
Lele15g2019 337 Pfam Ribosomal protein L3 1 221 IPR000597 GO:0003735|GO:0005840|GO:0006412
Lele15g2019 337 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 1 221 IPR045077 GO:0003735|GO:0005840|GO:0006412
Lele15g2019 337 FunFam 60S ribosomal protein L3 44 137 - -
Lele15g2019 337 FunFam Ribosomal protein L3 170 337 - -
Lele15g2019 337 Gene3D Ribosomal protein L3, domain 3 1 87 IPR044892 -
Lele15g2019 337 Gene3D - 88 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2019 Lele-ChrLele15 12887354 12890497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2019 1 334 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 73.575 0.0 553