Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2017 ATGGATCTCTCTTTGAAGATTGATCAATATCATGCTCAACACGAAAAAGAAGCAGATCACAAGGTAGAAGAAGAAGATCATGATGATGATAGGGAAGAAATTATGGCAAGAACAGCGAAGGTTGACGAAGAAGAAGCTCCTCATCATCATGAAGCCTCCATAGCTGCAGGAGATCAGAAAGAAGAACAAGAAGAAGAGGATGATGATCATAATGGATCAATGGTAGAAAACACTAAAACAAGAGAGGAGTTAAGTGTGTTACAAGTGGAGACAGATCGCATGAAAGAAGAAAACAAAGTTTTAAGGAAAGTGGTGGATCGAACGATGAAAGAGTTCTACGATCTTCAGATGAAATTCGCAATCATCCAGCAGAACCACAACAACAAACACCAGGACCCTCAGATCTCTGTCCCACTTCAAAACAATGAAAATCCTGGTGGTGAGGATGATCGTGTTAGCAAGATTGGATTGGGGTTATCATTGAGGTTACAGACCAGTGAACCAGAAGATGTTCAAAGAAGGGAAGGTGATCAAGAGTATAAGAATAATAAGGAATTATTAGAATTGACAAGTTTTGGAACATTATCGTCAGTTCAAAACAAAGCGCCTCGGACTATTCATCACGAGTCGCCTGGTATGAGTAATGCCCATAATAATGTTGCTTCTTCTTCACCACCAAATAGGAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAAGCAGCCACTATGAATGATGGGTGTCAATGGAGAAAATATGGACAAAAGATTTCTAAAGGGAATCCATGTCCTCGTGCCTATTATCGTTGCACTGTTGCCCCCGGCTGTCCCGTGAGAAAACAGGTGCAGAGATGCTTAGAGGACATGTCGATACTAATAACAACGTACGAAGGAACACACAACCATCCTCTTCCCGTTGGTGCAACAGCCATGGCTTCCACTGCTTATGCTGCTCACTACAACAACCCCAACTTCCTCCCATCATCAAACCCTAATAATATCATTGACCCTTCCAAAGGACTTGTCCTCGATCTCACCTCAACCTCATCTTCATCACCGTCCAGATTTTCTTGGACGCCGCCAAATAATTTTGCCAGTAGTTCTGCAGAAGAAAATAATAGGAGTACTACTGTATCTGCCATTGCTTCAGATCCTGAGTTTAGGGTTGCTGTGGCGGCTGCAATAACTTCCTTCATTAATAACAACAAAGACATCAATCATCAAAGTACTGTTCTTAATAATAATTCTTCAGGTGCAACGTCGTTGTCCACTTCTTTCGTTGGTGCCGGCAATAATGGAGGCTCTAATGGTAGTAGCAGCAGCAGCAGATGGATCTTAGAGTCCCTCCCATCATCATCACCAAAAGGGAAAACCCACCAGTTTTAA 1383 0.423 MDLSLKIDQYHAQHEKEADHKVEEEDHDDDREEIMARTAKVDEEEAPHHHEASIAAGDQKEEQEEEDDDHNGSMVENTKTREELSVLQVETDRMKEENKVLRKVVDRTMKEFYDLQMKFAIIQQNHNNKHQDPQISVPLQNNENPGGEDDRVSKIGLGLSLRLQTSEPEDVQRREGDQEYKNNKELLELTSFGTLSSVQNKAPRTIHHESPGMSNAHNNVASSSPPNRKARVSVRARCEAATMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTAYAAHYNNPNFLPSSNPNNIIDPSKGLVLDLTSTSSSSPSRFSWTPPNNFASSSAEENNRSTTVSAIASDPEFRVAVAAAITSFINNNKDINHQSTVLNNNSSGATSLSTSFVGAGNNGGSNGSSSSSRWILESLPSSSPKGKTHQF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2017 460 ProSiteProfiles WRKY domain profile. 238 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g2017 460 MobiDBLite consensus disorder prediction 431 460 - -
Lele15g2017 460 Pfam WRKY DNA -binding domain 244 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g2017 460 SMART WRKY_cls 243 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g2017 460 MobiDBLite consensus disorder prediction 1 59 - -
Lele15g2017 460 MobiDBLite consensus disorder prediction 211 229 - -
Lele15g2017 460 FunFam probable WRKY transcription factor 31 228 305 - -
Lele15g2017 460 MobiDBLite consensus disorder prediction 128 149 - -
Lele15g2017 460 MobiDBLite consensus disorder prediction 349 376 - -
Lele15g2017 460 MobiDBLite consensus disorder prediction 1 83 - -
Lele15g2017 460 MobiDBLite consensus disorder prediction 205 230 - -
Lele15g2017 460 SUPERFAMILY WRKY DNA-binding domain 236 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele15g2017 460 Gene3D WRKY domain 228 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele15g2017 460 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 50 409 IPR044810 GO:0003700
Lele15g2017 460 MobiDBLite consensus disorder prediction 128 143 - -
Lele15g2017 460 Coils Coil 77 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2017 Lele-ChrLele15 12859820 12863995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2017 36 337 WRKY Transcription Factor Family AT1G68150 46.855 1.09e-72 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele15g2017 WRKY 3.8e-24 CL0274