LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele15g2016	ATGGACGCCAACCGCCACCACAAACTTGTGAAGAAGTCTAAGCTTGAGCGCCGAAACGCCGTGAAGAACATCGATTACCAAGCTCCCACCACCACCTCATACGACGACGTCGTTTCTCTCGACCTTTTAGGCCAAACCAGCTTCAGGTTAAAGGGCTTCGACGGTGAATTCGACCTTCTTTTCCGCGGTTTAGGACTTTCTGGACCAGAAGCCTTCGAAATCCCAGCTGCAGAATGGAAAGCCCGAGAAGTTCGCTCTATCCATAGTAATAGTAACCGACTTGGTAAAAATGCCCGAGATGTAATTCCAATTTCTGCTGAATTTCAACGCCGGGTTGAAACGAATAGTGATATAGAGCTAAAAGGTAAGAACTTTCAACCTGGGGTGGAAAGGAAGATTACTGTTGCTTATTCTAATTCGAATGCTTTGGGGTCCAATCGGGATGGTGGTGGAGAAATCAAAAGGGTTAGGCCTACTGTTCTATTGCCGCCGCCGCCGCCGCCGCCAGGGATAGTGCGGCGGCCAATTGTTGATAGGGTTATTGATTCACCAATTCATGTTAGGGGCGTTAGTTCTTCTGGTGAAGATGAAGTGAGGGTCCCTAAAATAAATGAGGAGGGTGCTGACAGAGATGGCGGCAGCAGCGGTGGCGGCGATACTGGTGTGGTTGATGAGTCAGTTCATAATGTCTCACCATATGGGTCATTTAGATGCACTTTCTCCTCTTGGCAAAAGGGGGAGATTCTGGGAAAGGGGTCATTTGGTACAGTTTATGAAGGCTTTACAAGTGATGGGTTCTTCTTTGCAGTGAAGGAGGTTTCTTTGTTGGATCAAGGTAGCCAGGGCAAACAGAGCATTTCCCAACTTCAGCAGGAAATATCTCTCTTGAGTCGGTTTGAACATGAAAACATAGTTCGATATCTTGGCACGGACAAGGATGAAAGTACACTATACATCTTCCTTGAGCTTTTAACAAAAGGGTCATTGGCAAATCTCTATCGAAAGTACCATTTAAGGGATTCTCAAGTTTCTGCATACACGCGCCAGATTTTAAGTGGCTTGAAGTATCTTCATGATTGTAATGTGGTTCACAGGGACATCAAGTGTGCTAATATATTGGTTGATGCAAGTGGATCAGTAAAGCTTGCAGATTTTGGATTGGCAAAGGCAACTAAATTTAATGATCTTAGATCAAGCAAAGGCTCCCCTTACTGGATGGCCCCTGAGGTTGTAAATTTAAAGAGCCATGGTTATGGACCAGCAGCCGATATATGGAGCCTAGGATGTACGGTTCTGGAGATGTTGACGCGACAACCTCCTTACTCTGAATTGGAAGGGATGCAAGCATTATTTCGGATTGGCAGGGGTGAACCTCCACCGATTCCCAAATCAATATCGAAAGATGCGCGAGATTTTATTTGTAGATGCATACAAGTTAACCCTGACAGACGACCAACTGCAGCTATGTTGTTGGAACATGCATTTGTAAAGAGGAAATTCTTGCCTCCAATAAGTCCCTCTTCTCTGCTTGGTGGGAGAAACTAA	1545	0.455	MDANRHHKLVKKSKLERRNAVKNIDYQAPTTTSYDDVVSLDLLGQTSFRLKGFDGEFDLLFRGLGLSGPEAFEIPAAEWKAREVRSIHSNSNRLGKNARDVIPISAEFQRRVETNSDIELKGKNFQPGVERKITVAYSNSNALGSNRDGGGEIKRVRPTVLLPPPPPPPGIVRRPIVDRVIDSPIHVRGVSSSGEDEVRVPKINEEGADRDGGSSGGGDTGVVDESVHNVSPYGSFRCTFSSWQKGEILGKGSFGTVYEGFTSDGFFFAVKEVSLLDQGSQGKQSISQLQQEISLLSRFEHENIVRYLGTDKDESTLYIFLELLTKGSLANLYRKYHLRDSQVSAYTRQILSGLKYLHDCNVVHRDIKCANILVDASGSVKLADFGLAKATKFNDLRSSKGSPYWMAPEVVNLKSHGYGPAADIWSLGCTVLEMLTRQPPYSELEGMQALFRIGRGEPPPIPKSISKDARDFICRCIQVNPDRRPTAAMLLEHAFVKRKFLPPISPSSLLGGRN	514

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele15g2016	514	Gene3D	Transferase(Phosphotransferase) domain 1	325	501	-	-
	Lele15g2016	514	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	187	499	-	-
	Lele15g2016	514	SMART	serkin_6	243	496	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele15g2016	514	MobiDBLite	consensus disorder prediction	189	224	-	-
	Lele15g2016	514	Gene3D	Phosphorylase Kinase; domain 1	224	324	-	-
	Lele15g2016	514	ProSitePatterns	Protein kinases ATP-binding region signature.	249	271	IPR017441	GO:0005524
	Lele15g2016	514	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	362	374	IPR008271	GO:0004672\|GO:0006468
	Lele15g2016	514	Pfam	Protein kinase domain	244	495	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele15g2016	514	ProSiteProfiles	Protein kinase domain profile.	243	496	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele15g2016	514	SUPERFAMILY	Protein kinase-like (PK-like)	229	506	IPR011009	-
	Lele15g2016	514	FunFam	Mitogen-activated protein kinase 1, putative, expressed	241	508	-	-
	Lele15g2016	514	MobiDBLite	consensus disorder prediction	192	209	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele15g2016	Lele-ChrLele15	12851148	12854879	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele15g2016	14	498	MAP Kinase Kinase Kinase	AT4G08500	44.640	2.39e-136	405

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Lele15g2016		Pkinase	1.8e-69	CL0016