Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1989 ATGAAGAGATACAATTTGCTATTACATAGAAATACTGTGCTAAGTAAAAACCAAAAATATTTGCAGCAATAGTATTGGCAGAATGTGATGGTGCTTCTGGTGGCGTATTCGGCATGGGTTTACCCATTTGAAGTTGCTTTCCTGCACAGCTCTCCAAATAAGGAAGTGTTCATAGTGGACAATGTTGTTGATCTTTTCTTTGCTGTTGACATTGTTCTCACATTCTTCGTAGCTTTCATTGATCGAAGAACTCAACTATTAGTAAGAGACTTGAGAAAGATTGCCATGAGGTACTTGTCAACTTGGTTCGTGATGGATGTAGCATCAACTATTCCATATGAGGCACTAAGTTATGTAATCACAGGAAAACACAAGGTTGCGAAAATGAAGGCAGAGTATCTACCACCTAGAGAGGATGTTATTATGCAAAATGAAGCACCAGATGATGTTTACATCATAGTGTCAGGAGAAGTAGAGATCATTGATTGTGTAATGGAGAAAGAGAAAATTTTATGGACTTTACTAGCAGGGGACATGTTTGGAGAAGTTGGTGCACTTTGTTGCAAACCTCAATACTTTACCTATAGAACTAAAACTCTCACACAGCTCTTGAGGCTCAAAACCAATGCTCTAATAGAAGCAATGCAAAGTAAAAAGGAAGACAATATACAAATACTCAAAAATTTCCTTCAGCATTTCAAGCAACTAAAAGATCTCAGTATTAGAGATTTAATGGTAGATAGTGGAGAAGAAGAGGATCCAAACATGGCTGTGAACTTATTAACTGTCGCCAGTACAGGCAATGCTGCTTTTCTTGAAGAGCTTCTCAAGGCAGACATGAATGGTAACACTGCCTCATGGGACGCCATAGCATCAAAGCATCACACCATATTCAGAATCCTCTATCAACTTGCATGCCTCTCTGATCCACAAACAAGAGGTGAACTCCTGTGTACAGCAGCAAAAAGAAATAATCTAACAGTGATGAGTGAGCTTTTGCAACAAGGACTGAACGTAGACTCAAAAGATCACCATGGCATGACAGCAACCCAAGTAGCCATGGCAGAGAATCATGTGGAAATGGTTCAGCTGCTTGTCATGAATGGAGCAGATGTTTATGACATACAAACCCATAATTTTTCTGCTTCTGCTTTGAACGAAATGCTGCGAAAGCGCGAGATTGGGCATCGGATCACAGTGCACGAGGCCACACCCAGTGAGAATGTAGTAAGGGGAGATGAAGGTGAGGAGGATGGGCAGAGTTGGGGAAGATATAGTAAATCAAGCTTCCCAAGAGATTGA 1302 0.4048 MKRYNLLLHRNTVLSKNQKYLQQXYWQNVMVLLVAYSAWVYPFEVAFLHSSPNKEVFIVDNVVDLFFAVDIVLTFFVAFIDRRTQLLVRDLRKIAMRYLSTWFVMDVASTIPYEALSYVITGKHKVAKMKAEYLPPREDVIMQNEAPDDVYIIVSGEVEIIDCVMEKEKILWTLLAGDMFGEVGALCCKPQYFTYRTKTLTQLLRLKTNALIEAMQSKKEDNIQILKNFLQHFKQLKDLSIRDLMVDSGEEEDPNMAVNLLTVASTGNAAFLEELLKADMNGNTASWDAIASKHHTIFRILYQLACLSDPQTRGELLCTAAKRNNLTVMSELLQQGLNVDSKDHHGMTATQVAMAENHVEMVQLLVMNGADVYDIQTHNFSASALNEMLRKREIGHRITVHEATPSENVVRGDEGEEDGQSWGRYSKSSFPRD 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1989 433 MobiDBLite consensus disorder prediction 402 433 - -
Lele15g1989 433 Pfam Ankyrin repeats (3 copies) 292 372 IPR002110 GO:0005515
Lele15g1989 433 ProSiteProfiles Ankyrin repeat profile. 345 377 IPR002110 GO:0005515
Lele15g1989 433 Gene3D - 245 394 IPR036770 -
Lele15g1989 433 PANTHER POTASSIUM CHANNEL AKT1 279 394 IPR045319 GO:0005249|GO:0006813
Lele15g1989 433 FunFam Potassium channel KAT2 124 237 - -
Lele15g1989 433 SMART ANK_2a 312 341 IPR002110 GO:0005515
Lele15g1989 433 SMART ANK_2a 345 374 IPR002110 GO:0005515
Lele15g1989 433 SMART ANK_2a 206 238 IPR002110 GO:0005515
Lele15g1989 433 Gene3D Jelly Rolls 128 244 IPR014710 -
Lele15g1989 433 SUPERFAMILY cAMP-binding domain-like 127 232 IPR018490 -
Lele15g1989 433 Pfam Ion transport protein 24 115 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele15g1989 433 Pfam Cyclic nucleotide-binding domain 133 217 IPR000595 -
Lele15g1989 433 MobiDBLite consensus disorder prediction 407 421 - -
Lele15g1989 433 CDD CAP_ED 126 226 IPR000595 -
Lele15g1989 433 ProSiteProfiles Ankyrin repeat region circular profile. 345 372 - -
Lele15g1989 433 ProSiteProfiles cAMP/cGMP binding motif profile. 133 232 IPR000595 -
Lele15g1989 433 SUPERFAMILY Ankyrin repeat 254 382 IPR036770 -
Lele15g1989 433 Gene3D - 24 127 - -
Lele15g1989 433 SUPERFAMILY Voltage-gated potassium channels 25 118 - -
Lele15g1989 433 SMART cnmp_10 113 230 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1989 Lele-ChrLele15 12571269 12578661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1989 126 281 Ion Channels AT4G22200 66.250 1.85e-64 216