Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1988 ATGGTTTTTGAGCTATTCTATGACATTGTCCCCTTCACTGCAGAAAATTTCCGTGCGTTGTGTGCAGGAGAAAAGCGAGTTAGTCCCAAAACCAATGAGCCCCTGTCTTACGCACTATCTTTCTTTCACAAGGTTAAGAAAGGTAGCTCCTATGTGAAGGGAGGTGCTTTTTGCTATGAAACTGGGGAAGGTGGAGAAAGCATTTATGGTTCACATTTCCAAGTGCATGAGTCAAATAGCCTCAAGCATGACACAGAAGGGCTGTTAACGATGTCCAAGGTTCAGTTAGCTTCTTCTTCTCATTTTTTAATCACATCTAGAGCTGATCATACTCTGGACAGTTCTCATGTGATTTTTGGGAAGCTTGTGCAAGGGATTGGTACAGTAGGGGCAATTGCAGAATATTGTTCCCAGGTTCCGATTAGAATTGAGGGTTGCGGTTTGGTATATAATGTGAGTGATATTCCTCCTGGTGTGATTGTGTGGGCTTGTTGGCCTCCTCAAAGCGAAGTAAAGGAGAAAAAAAGGAAAGAAGGAAGGAAGGAAAGAAGAAAGAGTGGAAAGTAA 567 0.4268 MVFELFYDIVPFTAENFRALCAGEKRVSPKTNEPLSYALSFFHKVKKGSSYVKGGAFCYETGEGGESIYGSHFQVHESNSLKHDTEGLLTMSKVQLASSSHFLITSRADHTLDSSHVIFGKLVQGIGTVGAIAEYCSQVPIRIEGCGLVYNVSDIPPGVIVWACWPPQSEVKEKKRKEGRKERRKSGK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1988 188 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 136 IPR002130 GO:0000413|GO:0003755
Lele15g1988 188 SUPERFAMILY Cyclophilin-like 1 152 IPR029000 -
Lele15g1988 188 Gene3D - 1 154 IPR029000 -
Lele15g1988 188 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 101 113 IPR002130 GO:0000413|GO:0003755
Lele15g1988 188 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 5 20 IPR002130 GO:0000413|GO:0003755
Lele15g1988 188 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 IPR002130 GO:0000413|GO:0003755
Lele15g1988 188 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 129 IPR002130 GO:0000413|GO:0003755
Lele15g1988 188 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 134 IPR002130 GO:0000413|GO:0003755
Lele15g1988 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1988 Lele-ChrLele15 12554547 12556471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1988 1 132 U-box Gene Family AT5G67530 28.571 8.54e-09 52.4