Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1981 ATGGAGAAGTACGAGCTAGTGAAGGACATAGGATCTGGGAATTTCGGGGTGGCCAAGCTGATGCGAAATAAAGATAACAAGGAGCTTGTTGCCATGAAATACATTGAACGTGGTCACAGGATCGATTTGAATGTAGCCAGGGAAATCATAAACCATAGATCTCTTTGCCACCCGAACATAATTCGGTTCAAGGAGGTGTTTTTGACTCCAACACATCTTGTAATAGTCATGGAGTATGCAGCTGGTGGAGAGCTTTTTGATCGAATTTGCTCTGCTGGAAGATTCAGTGAAGATGAGGCTAGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGCCATTCTTTGCAAATCTGCCATCGAGACTTGAAGCTGGAGAATACCTTATTGGATGGCAGCCCTGCTCCACGTCTGAAAATTTGTGATTTTGGTTATTCTAAGTCATCTCTACTTCATTCAAGGCCAAAATCAACTGTGGGAACTCCAGCCTATATTGCACCAGAGGTTCTTTCACGTAGAGAATATGATGGAAAGTTGGCTGATGTATGGTCCTGTGGAGTAACTCTTTATGTGATGCTGGTGGGAGCATACCCATTTGAGGACCCAGATGATCCTAAGAACTTCAGAAAAACCATAAATCGGATTATATCTGTTCAATACACGATCCCAGAATATGTACACATATCTCAAGACTGTAAGCTTCTGCTATCGCGCATTTTTGTTGCAAATCCTGTGAAGAGAATAAACATGAAAGAAATCAAGTGCCACCCATGGTTTTTAAAGAACCTGCCAAGGGAATTGACAGAAACAGCCCAAGCTGTCTACTTCAAGAAAGAAAACCCAACATTTTCTCTTCAGAGTGCAGAAGACATAATGAAAATTGTTGAAGAGGCCAAAAGTCCACCCTCAGGTTCTAAGTCAGTCGGAGAGTTTGGCTGGGAAGAGGAAGGAGGAGAAGAAGGAGAAGGAGAAGGAGACAAAACAAATGCGGAGGCAAATGGTGAGGAGGAAGATGAGTATGAAAAGAGAGTCAAGGAAGCACAGACGAGCGGCGAAGTTAGTAAGGTTGTGATTTGTAATTTCGTGTTACAAACCAGACTGAGTTTGTGA 1113 0.4277 MEKYELVKDIGSGNFGVAKLMRNKDNKELVAMKYIERGHRIDLNVAREIINHRSLCHPNIIRFKEVFLTPTHLVIVMEYAAGGELFDRICSAGRFSEDEARYFFQQLISGVSYCHSLQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDPDDPKNFRKTINRIISVQYTIPEYVHISQDCKLLLSRIFVANPVKRINMKEIKCHPWFLKNLPRELTETAQAVYFKKENPTFSLQSAEDIMKIVEEAKSPPSGSKSVGEFGWEEEGGEEGEGEGDKTNAEANGEEEDEYEKRVKEAQTSGEVSKVVICNFVLQTRLSL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1981 370 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1981 370 SUPERFAMILY Protein kinase-like (PK-like) 2 289 IPR011009 -
Lele15g1981 370 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lele15g1981 370 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele15g1981 370 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1981 370 MobiDBLite consensus disorder prediction 299 351 - -
Lele15g1981 370 PANTHER SERINE/THREONINE KINASE 2 306 - -
Lele15g1981 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lele15g1981 370 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Lele15g1981 370 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
Lele15g1981 370 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1981 370 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Lele15g1981 370 MobiDBLite consensus disorder prediction 324 350 - -
Lele15g1981 370 CDD STKc_SnRK2 3 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1981 Lele-ChrLele15 12463549 12467777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1981 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 43.704 4.34e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele15g1981 Pkinase 4.6e-69 CL0016