Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1977 ATGAATTCTCCATTCGAAGTGGGCAGTCAAGGTGACAAGCCCCAGAATGAGGGGCTTAAATGTGGCCTTAAAGAACCAACTTTCTTGTATGGTGACTTGGATCTGTATGTATTAGAGGCAAAAAATCTTCCAAATTTGGATCTTTCTTCAGAAACAATGAGAAAATGTTTCACTATGGGTAATACTTGTACCCCTCCCTTCATGAAAGCACACAGGATAAGCACTGGGAAATATCATGTAGATACTAGTGATCCCTATGTCTCTGTCGTTCTGGCAGGGGCTACTGTAGCGCAAACTCGAGTAGTTCGTAACAATGAGCATCCTTCATGGGATGAGCATTTTATTGTTCCAGTGGCTCACCCCGCTGAAAAAGTGGAGTTTATTGTGAAAGATGATGATGCTCTTGGGGCCGAAATCATTGGAGTCGTAGAGATACCTGCTCAAAAGATTTTTTCTGGAAATACTATTAATAATTGGTTTCCAATCACTGGTGGGTACTCGATTTGCTCAAAAGGTACACCTGAGTTACATATCTCTATTCAGTATAAGCCATTTGGATCAGACGCTGCAGACAAATTTGGCATTGGAGCTGTAGCAGATTATCCAGGTGTTCCTAACACGTATTTTCCTCCTCGAAAAGGAGGGAAAGTGACTCTTTATCAAGATGCACATGTACCAGATGGTAAACTACCTGAAATTCCACTTGAGGAGGGAAAAGTCTTTCATCAGGGTAAATGTTGGGAGGATATTTGCCATGCAATTTCGGAAGCTCAAGAGCTGATATACATTGTAGGATGGTCTGTTTATCACCCTGTAAAGCTTGTCAGAGAACCAACAAGACCCTTGCCTGCTGGAGGAGAGCTTTCACTTGGAGAGTTGTTGAAATATAAGTCACAAGAAGGTGTCCGCGTGGTTATGCTGATCTGGGATGACAAGACTTCGCATGACAATTTTTTTTTGAAAACAGATGGGGTCATGCAGACCCATGATGAAGAAACTAAGAAATATTTCAAACACTCGACTGTTCATTGTGTGCTTGCTCCACGTTATGCAAGCAATAAGCTTAGTATTTTCAAGCAACAGGTTGTCGGAACCCTTTTTACGCATCATCAGAAGTGTGTTCTTGTTGACACTTATGCTTGTGAGGATAAAAGGAAAGTAACTGCTTTTATAGGTGGTCTAGATCTATGTGATGGCAGATATGATACTCCTGATCATCGGGCCTTTGTTGATTTGGACACAATCTTCCAAAATGACATTCACAATCCGGTATTCCCTTCAATTACTGGAGTACCAAGGGAACCATGGCATGACCTACATTGTAAAGTTGAGGGTCCAGCTGCATATGATATATTGACCAATTTTGAACAAAGATGGGGGAAAGCCAAAAAGTGGCGTGAATTCAAGCTAAAAAGGGTGGCAAATTGGAATGATGATGCTTTGCTAAGGTTAGACCGTATTTCATGGATTCTAACTCCATCGTCTGGTGCTGCTGGTGACCAAGTTGTTCAGGTAATTGATGAAGATGATCCAGAAAGCTGGAATGTGCAGGTGTTTCGGTCCATAGATTCAGGATCTGTCAAGGGTTTTCCAAAAGATATTGACGAAGCTAAGGCTCAGCATCTTCTCTGCGGAAAGAACTTAAAAGTAGACAAAAGTATCCATACCGGTTATGTAAAAGTAATAAGATCGGCCCAACACTTCATATATATAGAGAATCAATATTTTCTGGGATCCTCATATCACTGGCCTTCATATCAACATGCAGGTGCCGATAACTTGGTTCCAATGGAGTTAGCTCTGAAAATTGTCAGCAAGATCAATGCAAATGAACGGTTTTCCGTCTATGTTGTCATACCAATGTTTCCGGAGGGACCTCCAACTAGTAACGCTGTGCAGGAAATCTTGTTCTGGCAGGGACAGACAATATCTATGATGTACGGCATTGTTGCAGATGCCCTTAAAAGAAATGGCCTGTCTGATCAATATCATCCTCAAGATTATCTCAACTTTTATTGCCTTGGAAAGCGTGAACCTCAATCCAGTGAATGTTCCATATCTATGTCAACAGCTGACCGTGGTCTGGCATCGGTTTACAAATATAGACGTTTTATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGATCACTTTGTAATCCTGGGATCTGCAAATATTAACCAAAGATCCTTGGATGGTTCAAGAGACACAGAAATTGCTATGGGTGCCTATCAGCCTCAATATACATGGGCAAGAAAAAATTCTCATCCGCATGGTCAGGTGTATGGTTACAGAATGTCACTCTGGGCTGAACACCTTGGTTTTCTTGAGGATACTTTCAAGGAACCGGACAGCCTCGAATGTGTTCATCGCATGAATGAAATTGCCAGGAGCAACTGGAGCGCATATGTATCTGAGGAAGAGAAGGAGATGAGGGGACACTTGATGCAGTATCCAGTTCAGATTGCCAATGATGGAAGAGTTAGTGCCTTGAAAGATTGGGAAAACTTCCCTGATGTTGGTGGTAAAATTCTTGGATCACCCAACTCTCTTCCTGATACATTAACCACATAA 2577 0.4168 MNSPFEVGSQGDKPQNEGLKCGLKEPTFLYGDLDLYVLEAKNLPNLDLSSETMRKCFTMGNTCTPPFMKAHRISTGKYHVDTSDPYVSVVLAGATVAQTRVVRNNEHPSWDEHFIVPVAHPAEKVEFIVKDDDALGAEIIGVVEIPAQKIFSGNTINNWFPITGGYSICSKGTPELHISIQYKPFGSDAADKFGIGAVADYPGVPNTYFPPRKGGKVTLYQDAHVPDGKLPEIPLEEGKVFHQGKCWEDICHAISEAQELIYIVGWSVYHPVKLVREPTRPLPAGGELSLGELLKYKSQEGVRVVMLIWDDKTSHDNFFLKTDGVMQTHDEETKKYFKHSTVHCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVLVDTYACEDKRKVTAFIGGLDLCDGRYDTPDHRAFVDLDTIFQNDIHNPVFPSITGVPREPWHDLHCKVEGPAAYDILTNFEQRWGKAKKWREFKLKRVANWNDDALLRLDRISWILTPSSGAAGDQVVQVIDEDDPESWNVQVFRSIDSGSVKGFPKDIDEAKAQHLLCGKNLKVDKSIHTGYVKVIRSAQHFIYIENQYFLGSSYHWPSYQHAGADNLVPMELALKIVSKINANERFSVYVVIPMFPEGPPTSNAVQEILFWQGQTISMMYGIVADALKRNGLSDQYHPQDYLNFYCLGKREPQSSECSISMSTADRGLASVYKYRRFMIYVHAKGMIVDDHFVILGSANINQRSLDGSRDTEIAMGAYQPQYTWARKNSHPHGQVYGYRMSLWAEHLGFLEDTFKEPDSLECVHRMNEIARSNWSAYVSEEEKEMRGHLMQYPVQIANDGRVSALKDWENFPDVGGKILGSPNSLPDTLTT 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1977 858 SUPERFAMILY Phospholipase D/nuclease 552 790 - -
Lele15g1977 858 Pfam Phospholipase D Active site motif 366 400 IPR001736 GO:0003824
Lele15g1977 858 SMART pld_4 365 400 IPR001736 GO:0003824
Lele15g1977 858 SMART pld_4 704 731 IPR001736 GO:0003824
Lele15g1977 858 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 704 731 IPR001736 GO:0003824
Lele15g1977 858 SMART C2_3c 32 159 IPR000008 -
Lele15g1977 858 Pfam C2 domain 31 162 IPR000008 -
Lele15g1977 858 Gene3D C2 domain 30 192 IPR035892 -
Lele15g1977 858 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 29 184 IPR035892 -
Lele15g1977 858 FunFam Phospholipase D delta 237 480 - -
Lele15g1977 858 Gene3D Endonuclease Chain A 237 481 - -
Lele15g1977 858 Gene3D Endonuclease Chain A 508 757 - -
Lele15g1977 858 Pfam PLD-like domain 696 740 IPR025202 -
Lele15g1977 858 SUPERFAMILY Phospholipase D/nuclease 202 469 - -
Lele15g1977 858 Pfam Phospholipase D C terminal 778 848 IPR024632 -
Lele15g1977 858 CDD C2_plant_PLD 26 182 - -
Lele15g1977 858 PIRSF PLD_plant 20 858 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lele15g1977 858 ProSiteProfiles C2 domain profile. 14 160 IPR000008 -
Lele15g1977 858 PANTHER PHOSPHOLIPASE D 28 847 IPR015679 -
Lele15g1977 858 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 365 400 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1977 Lele-ChrLele15 12431074 12440268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1977 28 857 Phospholipase D Gene Family (Wang group) AT2G42010 52.503 0.0 901