Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1974 ATGGGGAAAAATAAGGTTAAGGGTCTTCTCTCCTTTCGATCCTCAAGCTTACGCCGTCGCCCGAAGAAGTCGGCTGATCATGTGCCACCACCACCGCCGCCGCCGCCGCAGGCGATCGTGACTGTCGGCTCGCCTAGTGTTGGTGGTGCTGGGGCGTTGGTGAAGACCAAGAAGAAGGCCGGCGTCGCGAGGTTGTGGATGAGGTTTAATCGGTCGGGTCAATCTGAGCTTGTTGAGTTGGATAAGAACGCCATTATCAGACTCGCGGCGATTCCGGCCAGGGATTTGAGGATTTTGGGCCCGCTCTTCTCTCACTCCTCCAATATCCTTGCCAGGGAGAAAGCAATGGTAGTCAATTTGGAGTTTATAAAGGCCATAGTCACAGCTGAAGAAGTCCTTGTTCTTGATCCTCTTTCCCATGAGGTTCTTCCATTTGTTGAACAACTCAGGCAACAACTTCCAAATAAAACTCAGCCAAGACTTCATGGCCGTGTAGAAGAACAAGAAAATGAACTGCTTGTTTCAACTGGTAGACAATGGTCACCTGTGCCAGAGCCCACAGATGGTTTGCAAGCTGAGCTTCCATTTGAGTTTCAAGTTCTAGAGATCGCTTTAGAAGTTGTCTGTACATATCTGGACTCAAATGTGGCAGACCTTGAGAAAGGTGCTTATCCTGTATTAGATGAATTGGCTAGAAACGTTAGCACGAAGAATCTTGAACATGTGCGAAGTTTGAAAAGCAACCTTACACGTTTGCTGGCTCGTGTGCAAAAGGTGCGGGATGAAATTGAACATCTTTTAGATGACAACCATGATATGGCACAATTGTATTTGACGAGGAAGTGGTTGCAGAATCAGCAATCTGAGGTTCTCTTGGGAGCCATAGCCTCAAATGCCCTTGCTACTACAGCCCTTGTTCCTCACCATGGCTCTAACAGAAGTGGAAGTCTTGTGACTAGCAATGCCATGGATGATTCTGATGTTGAGGATCTAGAGATGTTGCTTGAGGCATATTTTATGCAGTTGGATGGAACTCGGAACAAGATATTATCTGTGAGAGAGTATATTGATGACACAGAGGACTATGTCAACATCCAACTTGACAGCCATAGAAATGAACTTATTCAGCTTCAGTTGACCCTGACCATCGCATCATTTGCCGTTGCTTTTGAGACTATGATTGCTGGCATATTTGGTATGAACATCCCTTTTACATGGAACAATATTGACGGAGTTTTCTGGCCACTTGTTGGGGTTATTACTGCAGCTAGCATATTGCTTTTTTTCATTGTCTATGGATATGCAAGATGGAAAAAGTTGCTTGGTTCTTAA 1332 0.4557 MGKNKVKGLLSFRSSSLRRRPKKSADHVPPPPPPPPQAIVTVGSPSVGGAGALVKTKKKAGVARLWMRFNRSGQSELVELDKNAIIRLAAIPARDLRILGPLFSHSSNILAREKAMVVNLEFIKAIVTAEEVLVLDPLSHEVLPFVEQLRQQLPNKTQPRLHGRVEEQENELLVSTGRQWSPVPEPTDGLQAELPFEFQVLEIALEVVCTYLDSNVADLEKGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNHDMAQLYLTRKWLQNQQSEVLLGAIASNALATTALVPHHGSNRSGSLVTSNAMDDSDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDSHRNELIQLQLTLTIASFAVAFETMIAGIFGMNIPFTWNNIDGVFWPLVGVITAASILLFFIVYGYARWKKLLGS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1974 443 FunFam Magnesium transporter MRS2-1 54 137 - -
Lele15g1974 443 Coils Coil 242 269 - -
Lele15g1974 443 MobiDBLite consensus disorder prediction 1 37 - -
Lele15g1974 443 Gene3D - 53 137 - -
Lele15g1974 443 Gene3D Magnesium transport protein CorA, transmembrane region 139 374 - -
Lele15g1974 443 Pfam CorA-like Mg2+ transporter protein 329 431 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele15g1974 443 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 379 431 IPR045863 -
Lele15g1974 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 52 441 IPR039204 -
Lele15g1974 443 CDD Mrs2_Mfm1p-like 66 440 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1974 Lele-ChrLele15 12408866 12411928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1974 7 443 MRS2 Gene Family AT3G58970 64.640 0.0 536