Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1961 ATGGCAGATAATAAGCTCAGCCAAATTGATCCATCTTCTTCTCCAACCACTTCAAAATCCGACATAGAAAAGCCTCACAGAAACCTTCAAGATGATCAGCAACATGAGAACGTTGACTACACCCAAAGGGCCCAGTGGCTTCGAGCTGCCATTCTCGGAGCCAACGACGGCTTGCTCTCGACGGCGTCACTCATTATGGGAGTTGAAGCCGTAAGGATGGACGTCAAAACAATGATCCTCACCGGAGTTGCGGGTTTAGTTGCCGGAGCTTGTAGTATGGCAATCGGAGAGTTTGTATCCGTGTACTCGCAGTATGATATGGAGGGAGCTCAGTTGAAGAGAGAAAGAAAAGAAGTGGACAAAGCGAAGTTACCCAATCCATTTTACGCGGCAGCAGCCTCGGCGATCGCGTTCTCAGTCGGGGCGGTGGTGCCGCTGCTCGGGGCGGCGTTTATAAAAGAGTACAAGGTGAGGTTGGTGGTGGTGGTGGGTGTGGTGAGCATGGCATTGTTAGGGTTCGGAGTGGTGAGTGCTATTTTGGGGAAAGCTCCGGTGGTGAAGTCGTCTTCTAGGGTTTTGGTTGGAGGGTGGCTCGCCATGGCAATCACTTTTGGCCTAACAAAGTCTGTGCATTCCATCATCGGTGTTTGA 651 0.5115 MADNKLSQIDPSSSPTTSKSDIEKPHRNLQDDQQHENVDYTQRAQWLRAAILGANDGLLSTASLIMGVEAVRMDVKTMILTGVAGLVAGACSMAIGEFVSVYSQYDMEGAQLKRERKEVDKAKLPNPFYAAAASAIAFSVGAVVPLLGAAFIKEYKVRLVVVVGVVSMALLGFGVVSAILGKAPVVKSSSRVLVGGWLAMAITFGLTKSVHSIIGV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1961 216 MobiDBLite consensus disorder prediction 1 19 - -
Lele15g1961 216 MobiDBLite consensus disorder prediction 20 36 - -
Lele15g1961 216 MobiDBLite consensus disorder prediction 1 36 - -
Lele15g1961 216 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 26 210 IPR008217 GO:0005384|GO:0030026
Lele15g1961 216 Pfam VIT family 123 207 IPR008217 GO:0005384|GO:0030026
Lele15g1961 216 Pfam VIT family 47 122 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1961 Lele-ChrLele15 12332745 12333395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1961 22 212 Nodulin-like Gene Family AT3G43660 65.641 1.27e-86 253
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0509 13 17280521 17281180 Lele15g1961 15 12332745 12333395 hybridization
Lele14g0434 14 16025456 16026136 Lele15g1961 15 12332745 12333395 hybridization