Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1960 ATGGCGGATCACAAGCCAATCCAAATTACTCCAGCATCTCCCAGTGAATCATCCCCATCAAACCCTTCAAAAACCTTCATTTTCGACATAGAATTACACAACCAACAAAACCCTAATGATCATCACCAGCAAGATGAGATTGAGGCTGTTGACTATGCCCAACGGGCTCAATGGCTTCGAGCCGCCGTCCTCGGAGCCAACGACGGCTTGCTCTCGACGGCTTCACTCATGATGGGTGTGGGAGCCGTTAGAAAGGACGTCAAGACGATGATCCTCACTGGAGTTGCCGGCTTGGTCGCTGGAGCTTGTAGCATGGCAATAGGAGAGTTCGTGTCCGTGTACTCGCAGTATGACATCGAAGTATCTCAGTTGAAGAGGGAAGGAAAAGAGGTAAAGAAAGCTGAGTTGCCGAACCCGTTTTACGCCGCAGTGGCCTCCGCGGTCGCCTTCGCCATGGGCGCGGTGGTGCCGCTGCTCGGGGCAGCGTTCATTAAAGATTACAAGGTGAGGTTAGGGATGGTGGTGGCCGTCGTGAGCCTAGCCTTGTTGGTATTCGGAGTTGTGAGTGCAGTTTTGGGGAAAGCTCCGATGGTAAAGTCATCTTTGAGGGTTTTATTTGGAGGTTGGGTGGCCATGGCAATCACTTTCGGCTTAACAAAATCAGTGGATTCCATTGGGCTTTGA 684 0.5161 MADHKPIQITPASPSESSPSNPSKTFIFDIELHNQQNPNDHHQQDEIEAVDYAQRAQWLRAAVLGANDGLLSTASLMMGVGAVRKDVKTMILTGVAGLVAGACSMAIGEFVSVYSQYDIEVSQLKREGKEVKKAELPNPFYAAVASAVAFAMGAVVPLLGAAFIKDYKVRLGMVVAVVSLALLVFGVVSAVLGKAPMVKSSLRVLFGGWVAMAITFGLTKSVDSIGL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1960 227 Pfam VIT family 59 134 IPR008217 GO:0005384|GO:0030026
Lele15g1960 227 Pfam VIT family 133 219 IPR008217 GO:0005384|GO:0030026
Lele15g1960 227 MobiDBLite consensus disorder prediction 1 23 - -
Lele15g1960 227 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 33 223 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1960 Lele-ChrLele15 12318484 12319167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1960 34 227 Nodulin-like Gene Family AT3G43660 68.718 6.85e-95 274