Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1959 ATGGGATGGTCCACGTCAGCGGAATCTTACTGTGAAACACATGCGAAGGCATCCTTCAAGCAACATCGAAAGCGCGTGACCTTCACACCTATAAATCCCAACATCCTCTGCCCAAGCTTCGTCGTTCATCCCGAGTCCCTTGCGGCCTCTCCGATTGAACCTTGTTGTCATTATTGTCCAAGGACTAGCAAAATGAACAGAAGTGTTGGAATTGTGATTGATGAGTCTAGCATCATGAAAGCAGTTGAACCATTGCCAGAGGATTTTGATCCAACGGCTGTGATTGAGGATCCTGTACCACCCCTAGTTGAAAATAATGTAAATGGTCATGCGGTGAACAAGATGAGTGAGGATAAAAGTAAAAGAGAGATAGTACTTGGCAGGAATGTTCATACCACATGCTTGGAAGTCACAGAACCAGATGCTGATGATGAGGTGACAGGGGACAGGGAAGCTTACATGGCAAGTGTTTTGGCTAGATACAGGAAATCTCTGATGGAAAGGACGAAGCATCATTTAGGTTATCCCTATAATTTGGATTTCGACTATGGTGCCCTTGCCCAGCTGCAGCACTTTTCTATAAACAACTTGGGAGATCCATTTATTGAAAGTAACTATGGCGTCCACTCACGGCAGTTTGAAGTAGGTGTTTTGGATTGGTTTGCCCGATTATGGGAGATTGAGAAAAATGAGTACTGGGGCTATATAACAAACTGTGGCACAGAAGGGAATCTACATGGCATTCTAGTTGGGAGAGAGGTTTTCCCAGATGGGATTCTGTATACCTCACGGGAAACACATTATTCTGTTTTTAAAGCTGCTCGTATGTACAGAATGGAATGTGTGAAAGTTGACACACACTGTGCTGGGGAGATTAATTGTGATGATTTCAAGGCCAAGATTATACGTAACAAAGACAAGCCAGCAATTGTAAATGTGAATATAGGAACAACTGTCAAAGGAGCTATGGATGATCTTGATCTAGTAATAAAGACACTTGAAGAAGTAGGATTTTCACATGACCGGTTCTACATCCACTGTGACGGAGCTTTATTTGGTCTCATGATGCCTTTTGTCAAACGCGCTCCAAAAGTCTCTTTTAAGAAGCCTATAGGCAGTGTGAGTGTATCTGGCCACAAATTTGTGGGGTGCCCTATGCCTTGTGGTGTGCAAATAACTAGATTGGAGCACGTCAATGTTCTCTCCAGGAATGTGGAGTACCTAGCTTCTAGGGATGCCACAATTATGGGAAGTCGAAATGGACACGCTCCCATCTTCCTCTGGTACACTTTAAACCGAAAGGGATACCGGGGTTTCCAGAAAGAAGTACAGAAATGCTTGAGGAATGCTCATTACTTGAAAGACCGCCTCAGGGACGCCGGTATTGGCGCAATGCTTAACGAGCTAAGCAGCACAGTCGTGTTTGAGCGGCCACACGATGAGGAGTTTACTCGCAGGTGGCAACTAGCATGCCAAGGCAACATAGCTCATGTTGTGGTGATGCCAAACATTACAATTGAGAAGCTCGACATATTTCTGGAGGAGCTAGTTCAGAAACGAGCCAAGTGGTTTGAAGACGGCAAGTGTCAGCCTCTTTGTATTGCGTCTGACGTAGGTGAAAAGAGTTGCATTTGTGCCTTGCACAAGTGA 1650 0.4473 MGWSTSAESYCETHAKASFKQHRKRVTFTPINPNILCPSFVVHPESLAASPIEPCCHYCPRTSKMNRSVGIVIDESSIMKAVEPLPEDFDPTAVIEDPVPPLVENNVNGHAVNKMSEDKSKREIVLGRNVHTTCLEVTEPDADDEVTGDREAYMASVLARYRKSLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYTSRETHYSVFKAARMYRMECVKVDTHCAGEINCDDFKAKIIRNKDKPAIVNVNIGTTVKGAMDDLDLVIKTLEEVGFSHDRFYIHCDGALFGLMMPFVKRAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHVNVLSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLRDAGIGAMLNELSSTVVFERPHDEEFTRRWQLACQGNIAHVVVMPNITIEKLDIFLEELVQKRAKWFEDGKCQPLCIASDVGEKSCICALHK 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1959 549 Gene3D Aspartate Aminotransferase, domain 1 432 520 IPR015422 GO:0003824
Lele15g1959 549 Gene3D - 188 431 IPR015421 GO:0003824
Lele15g1959 549 PANTHER - 112 549 - -
Lele15g1959 549 Pfam Pyridoxal-dependent decarboxylase conserved domain 259 470 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele15g1959 549 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 373 394 IPR021115 GO:0016831
Lele15g1959 549 SUPERFAMILY PLP-dependent transferases 168 520 IPR015424 -
Lele15g1959 549 FunFam Serine decarboxylase 1 188 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1959 Lele-ChrLele15 12308382 12311753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1959 272 455 Calmodulin-binding Proteins AT1G65960 26.804 8.19e-09 55.8