Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1958 ATGGCTTCCCGTGAACCTGGAGTTCATGTCTCACTGAACCAGGTGGGAGCAGTTCCAAACCATGCAGATGAAAAAGGCAATAGTCAAGAGGATGGTGGTAACAATTTCGATTACTCTCAAAGGGGACAATGGCTTCGAGCCGCGGTTTTGGGAGCCAACGATGGGCTGGTCTCGGTTGCTTCATTGATGATGGGTGTAGGAGCTGTGAAAGAAGATGTGAGAGCCATGATTCTTGCTGGTTTTGCAGGTACAATTGCAGGAGCCTGTAGTATGGCCATAGGAGAATTCGTGTCCGTGTACACTCAATACGACGTAGAGTTCATGCAGATGAAGAGGGATCAGAATGACGGGAAAGAAATGGGGGATACAGACAAAAGGAAGAAATTACCTAATCCATTTCAGGCTGCTTTGGCTTCTGCATCCTCTTTCGCCGTGGGCGCGCTTGTGCCTTTGCTTGCGGCTGCATTCATAAAAAACTACAAGGTGAGGCTAATGGTGGTTGTGTTTGTGGCTAGCTTGGCTCTTGTGGTGTTTGGAGGGTTGGGAGCTGTGTGGGGAAAGACTCCTGTGGTTAGGTCTTGTTTTAGGGTTCTGGTTGGAGGATGGATAGCCATGGCTATCACTTTTGGGTTAACCAAATCATTGGATTCTGGGGGAGTTCAGTTATGA 669 0.4828 MASREPGVHVSLNQVGAVPNHADEKGNSQEDGGNNFDYSQRGQWLRAAVLGANDGLVSVASLMMGVGAVKEDVRAMILAGFAGTIAGACSMAIGEFVSVYTQYDVEFMQMKRDQNDGKEMGDTDKRKKLPNPFQAALASASSFAVGALVPLLAAAFIKNYKVRLMVVVFVASLALVVFGGLGAVWGKTPVVRSCFRVLVGGWIAMAITFGLTKSLDSGGVQL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1958 222 CDD Nodulin-21 43 189 - -
Lele15g1958 222 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 27 216 IPR008217 GO:0005384|GO:0030026
Lele15g1958 222 MobiDBLite consensus disorder prediction 13 37 - -
Lele15g1958 222 Pfam VIT family 45 116 IPR008217 GO:0005384|GO:0030026
Lele15g1958 222 Pfam VIT family 121 212 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1958 Lele-ChrLele15 12303462 12304130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1958 20 220 Nodulin-like Gene Family AT3G43660 63.682 4.54e-88 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0516 13 17352162 17352557 Lele15g1958 15 12303462 12304130 hybridization
Lele14g0438 14 16048955 16049689 Lele15g1958 15 12303462 12304130 hybridization