Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1955 ATGGGGACATGCATCCAAATTCTGGCGTTTGGTGCTTCTCACTTGTCGTCACCGTTCCCTCCCTCCCTCACTAACGCTCCATCGTCGTCTTCTTCATTCTGCAACCAGAAGCACCGATTGATCCATCATACTCCATTGATTATGATGGCCTTTGTTCTTCAGGCACTCATAATTGGGCTTTGCCTCTCAGTGACAACGGTGCTGAACAGTGAAGCGCAGCCTCTTCGAGTGGGTTTCTACTCAGAAACATGCCCAGACGCAGAATCCATCGTGTCAGCCGTCGTAAACGACGCCATTTCTTCCGACCCCAACATGGCCGCCATCTTGCTCAGACTACACTTCCATGACTGCTTCGTTGAGGGATGTGATGGGTCGATTCTGATAGAGAATGGGGAGAAATCGGAGAAGAATGCGTTTGGGCATCAAGGAGTGAGAGGATTCGATGTGATCGAGAGAGCTAAGTCTCAATTGGAAGACACTTGCCCCGGTGTCGTTTCGTGCGCTGACATTGTCGCTTTAGCTGCCAGAGACGCCGTCTTCTTGGCAAATGGGCCATCATACAGAGTGCCAACGGGAAGAAGGGATGGATTGGTATCAAACATATCGCTGGCAGATGAGATGCCAGAGGTGTCCGATTCAATCTTCCAACTCAAAGCTAAGTTCAGAAATAAAGGCCTCTCTGACAGAGACCTCGTCCTCCTCAGCGCGGCACATACAATAGGTACCACAGCCTGCTTCTTCATGACCAGAAGACTCTACAACTTCATGCCGGGTGGCGGATCCGACCCATCAATTCGTCCAGAATTCCTACCGGTGCTAACATCAAGGTGTCCAAAGAACGGCGATGTCAACGTGCGGCTAGCGATGGACGAAGGGAGCGAGAGGGAATTCGACAAACACATATTAGAGAACATAAGGCAAGGATTTGCAGTGTTGGAGTCAGATGCAAGGCTTGCAGATGATGAGAACACAAGGAGTGTGATTGAATCATTCTTTGATCCAATGTTTGCAGCATCTTTTGAGTCTGATTTTGTTGATTCTATTGTGAAGATGGGCCAAATTGGAGTCAAGACTGGTTCACTTGGAGAGATTAGGCGTACGTGCTTACGCATGCGGAGAAGGAGAATGACTCCTGCTTTAACTGGTTCTACTTCTCCAGTCCCCATTAATGGTTTCCTCCTGTCATTCCCTTTCCTACAACTTCAATCTCCCCCCGCCTTCAAATCACCCAATCGCTCCCCTGCCCCTCCCTTATTCCTTCGTCCCATCCGAGCCTCTGTCTCCGTTCCCCGGAGTCGGCGCCTGCTCATGACACCCTCAAGCTTCCTCTTCGCAAAATCCCCAGTGACTATGATCTGGAGAGGGGCACTAGGGGCAGTGAAGGATCAAACAAGCATCGGTTTAGCCAAGGTTGGAAGCACCACCACCCTTGCTGACCTCGATGTCGCCATTGTTAAGGCCACCAAGCACAATGAGGCCCCCAACGATGAGAAATATGTTAGGGAGATCCTTAGCTTAACAAGCTACTCCCGCTCCCATGTTTGTTTGGACTTCATATCACATATTGCAACTTTAAATTGGATTGTATTTGATGTGGGAGAAGCACAGAACCATCGAATTGTGATGGTGGCTCTCTACCCTATATTGAAGGAGAGTTTCCAAATATATTATGAAATGATAGAAATTTCGGGTATCTTAGTTGACCGTTTTGAGGACATGGAGATTCAAGATTGCATCAAGATTTACGAAATTTTCCGTCGAGTCGAAAGGATCACCTCAAAGAAACTCGAGATCATGGATGATTTCATTAGAAAGAGAACTGTCATGGCAAACTTAAAAAGAAATGCAAAAACCCCAGAAGAAAATATTGAAGAACCAGAAAAGCTAGAGCCACCACGAGAAGATATGAACGCAATCAAGGCACTACCGCCACCAGAGACAAAAGAGGAACCAATAGAAGAGCCTAAAATAGAGGAACCAAAAGTTGTACAAACAGAAGGTGACTTGTTGCACTTAGGAGACAATGACACGGTAACAAGAGAAGATCATGAAAATAAACTAGCCTTGGCACTGTTCGACGGCGTAGGACCGACGACTTCTGAAGCATCTGGTGCCACATTAGCTCTTCCATGGCATGCTATTGAAGATGGTTCGGATTGGGGAAAAACATTGGTGGAATCAGCAAGCAAATTGTCAAACCAGAAGCCAACATTAGCAGGTGGGTTTGATACACTATTGTTGGATGGGATACCCTTTCGCAGCTTCAATGGCGGTGGCACCTCCGCCTTACGTTCAAATGAAGGATATAGAGAAAAAGCAAAAATTGTTGACAGAGGAACAACTATTGTGGCAGCAATATCAAAGAAATGGCATGCAGGGACATATTGGAATGACAATGCAACCTAG 2406 0.4701 MGTCIQILAFGASHLSSPFPPSLTNAPSSSSSFCNQKHRLIHHTPLIMMAFVLQALIIGLCLSVTTVLNSEAQPLRVGFYSETCPDAESIVSAVVNDAISSDPNMAAILLRLHFHDCFVEGCDGSILIENGEKSEKNAFGHQGVRGFDVIERAKSQLEDTCPGVVSCADIVALAARDAVFLANGPSYRVPTGRRDGLVSNISLADEMPEVSDSIFQLKAKFRNKGLSDRDLVLLSAAHTIGTTACFFMTRRLYNFMPGGGSDPSIRPEFLPVLTSRCPKNGDVNVRLAMDEGSEREFDKHILENIRQGFAVLESDARLADDENTRSVIESFFDPMFAASFESDFVDSIVKMGQIGVKTGSLGEIRRTCLRMRRRRMTPALTGSTSPVPINGFLLSFPFLQLQSPPAFKSPNRSPAPPLFLRPIRASVSVPRSRRLLMTPSSFLFAKSPVTMIWRGALGAVKDQTSIGLAKVGSTTTLADLDVAIVKATKHNEAPNDEKYVREILSLTSYSRSHVCLDFISHIATLNWIVFDVGEAQNHRIVMVALYPILKESFQIYYEMIEISGILVDRFEDMEIQDCIKIYEIFRRVERITSKKLEIMDDFIRKRTVMANLKRNAKTPEENIEEPEKLEPPREDMNAIKALPPPETKEEPIEEPKIEEPKVVQTEGDLLHLGDNDTVTREDHENKLALALFDGVGPTTSEASGATLALPWHAIEDGSDWGKTLVESASKLSNQKPTLAGGFDTLLLDGIPFRSFNGGGTSALRSNEGYREKAKIVDRGTTIVAAISKKWHAGTYWNDNAT 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1955 801 FunFam Peroxidase 78 225 - -
Lele15g1955 801 Pfam Peroxidase 92 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 ProSitePatterns Peroxidases proximal heme-ligand signature. 230 240 IPR019793 -
Lele15g1955 801 CDD secretory_peroxidase 75 364 IPR033905 GO:0004601|GO:0042744
Lele15g1955 801 PANTHER PEROXIDASE 25-RELATED 57 365 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 PRINTS Haem peroxidase superfamily signature 183 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 PRINTS Haem peroxidase superfamily signature 165 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 PRINTS Haem peroxidase superfamily signature 106 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 MobiDBLite consensus disorder prediction 617 635 - -
Lele15g1955 801 SUPERFAMILY GAT-like domain 533 603 - -
Lele15g1955 801 Gene3D - 78 368 - -
Lele15g1955 801 PRINTS Plant peroxidase signature 229 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 PRINTS Plant peroxidase signature 145 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 PRINTS Plant peroxidase signature 164 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 PRINTS Plant peroxidase signature 183 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 PRINTS Plant peroxidase signature 304 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 PRINTS Plant peroxidase signature 346 359 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 PRINTS Plant peroxidase signature 84 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 PRINTS Plant peroxidase signature 108 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 ProSiteProfiles Plant heme peroxidase family profile. 74 372 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 MobiDBLite consensus disorder prediction 615 653 - -
Lele15g1955 801 Gene3D Peroxidase, domain 2 208 351 - -
Lele15g1955 801 Gene3D - 449 526 IPR008942 -
Lele15g1955 801 FunFam Peroxidase 208 351 - -
Lele15g1955 801 SUPERFAMILY ENTH/VHS domain 479 513 IPR008942 -
Lele15g1955 801 SUPERFAMILY Heme-dependent peroxidases 75 370 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele15g1955 801 Pfam ANTH domain 479 528 IPR011417 GO:0005543
Lele15g1955 801 Pfam ANTH domain 533 592 IPR011417 GO:0005543
Lele15g1955 801 ProSitePatterns Peroxidases active site signature. 106 117 IPR019794 GO:0004601
Lele15g1955 801 Gene3D ANTH domain 527 605 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1955 Lele-ChrLele15 12275538 12285321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1955 68 368 Peroxidase AT1G77100 57.705 3.05e-113 345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0451 14 16154547 16160460 Lele15g1955 15 12275538 12285321 CCT
Lele15g1936 15 12091453 12098227 Lele15g1955 15 12275538 12285321 CCT
Lele16g1970 16 12029027 12032556 Lele15g1955 15 12275538 12285321 CCT
Lele15g1955 15 12275538 12285321 Lele15g1955 15 12275538 12285321 ECH
Lele13g0519 13 17371825 17373478 Lele15g1955 15 12275538 12285321 hybridization
Lele14g0442 14 16075857 16078332 Lele15g1955 15 12275538 12285321 hybridization