Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1954 ATGTCGGAACAATCAGGAGTTCAAAGTAGTGAAGCCCTCCTCCCGGGGTGGTTGAGGGGGGCAAGTGTACGGGGCATAAATTCACAGGAAAAATTATTGGTTTGTGTGCAAAGCTTAGAGGTTAACGTTCCAAAGACCAAAAAGACTTACTGCAAGAATAAAGAATGCAAGAAGCACACCTTACATAAGGTAACACAATACAAGAAAGGGAAAGATAGCCTTGCAGCTCAGGGTAAGCGCCGTTATGACCGCAAACAGTCCGGATATGGTGGCCAGACGAAGCCTGTCTTCCACAAGAAGGCAAAAACCACAAAGAAAATTGTCTTGAGGCTGCAGTGTCAGGCATGCAAACACGTATCCCAACACGCAATCAAGAGATGTAAACATTTTGAGATCGGTGGTGATAAGAAGGGGAAGGGAACCTCTCTGTTTTAG 435 0.4552 MSEQSGVQSSEALLPGWLRGASVRGINSQEKLLVCVQSLEVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQACKHVSQHAIKRCKHFEIGGDKKGKGTSLF 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1954 144 MobiDBLite consensus disorder prediction 67 96 - -
Lele15g1954 144 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 41 144 IPR000552 GO:0003735|GO:0005840|GO:0006412
Lele15g1954 144 Gene3D - 40 144 - -
Lele15g1954 144 MobiDBLite consensus disorder prediction 67 87 - -
Lele15g1954 144 FunFam 60S ribosomal protein L44 40 144 - -
Lele15g1954 144 Pfam Ribosomal protein L44 58 133 IPR000552 GO:0003735|GO:0005840|GO:0006412
Lele15g1954 144 ProSitePatterns Ribosomal protein L44e signature. 102 113 IPR000552 GO:0003735|GO:0005840|GO:0006412
Lele15g1954 144 SUPERFAMILY Zn-binding ribosomal proteins 41 133 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1954 Lele-ChrLele15 12273095 12274816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1954 41 144 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 94.231 2.75e-68 200