Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1943 ATGAAGTTTAAGCTAATCGTCATTATGGAATCTAGTGATCTTTCAAATAACCAGCTAGAAGGAGACATCCCTGTCAATGGCTCATTTCAATTGTTTACTCCACTCAGTTTCGGAGACAATCCTCATTTAAGACCAATAGACCTTACACCTGGACCAGTTTTGCCTACACCTCTAGGCAATAGTTCAACTGGAGTTATTGCTGCAGGAGTTGGTGCTGTTGCTGTGGTGTTTACAGCCTCTGCAATTGCACTTGCTTATTATTACTGGAAAAGGATTCCACTTGCTTACTGCTGGAAAAGGGGACCGCCATATTATGCCTTTGATGTTTATGATGAGGAGGAGCTTGAAGCTCACTTTGGTCAGCTTAAAAAGTTTCCCCTGTGTGAGCTTCAAGTTGCAACAGACAGCTTTAATAGCAAAAACATTCTGGGTAGAGGTGGATTTGGTAAGGTTTATAAAGGACGGTTGAATGATGGATCTTTAGTTGCAGTGAAAAGACTTAAAAAGGAAGGTGCTCAGGGTGGAGAGCTGCAATTTCTAACAGAAGTAAAAATGATCAGCTTGGCTGTCCATCGTAATATTCTCCGGCTTCATGGTTTTTGCATGACTCCAACTGAACGGTTGCTTGTGTATCCTTTCATGGCTAACGGTAGTGTGGCATCATGTTTACGAGACCGCTCTAAATCAAAACCCCTGCTTGAATGGCCTGTACGGAAGCGAATTGCATTGGGAGCTGCGAGGGGGCTTGCTTATTTACATGATGATTGTGATCCAAAGATCATTCACCGTGATGTTAAGGCTGCAAATATATTGTTGGATGACGAATATGAAGCAGTTGTTGGGGACTTTGGTTTGCAAAACTTATGGAGTACGAAGATACTCATGTTACCACAGCTAGGGCTTTTTGATCTAGCACGACGTGCCGTTGACGATATTGTCTTGATACTTGATTGGGAGAATCTTTCAATGCCCTCCTTTCATCTTCTTCCTTTTCTACCAGTTTCTTATCCTCTGTTTCTATCACTTCCACTTATAAATTATAAGCGCACTGTCTCCGGTCCCAAGCCCGGGTCGTTGCCCGTAACTTTGACTTCCATTAGAGAGATGGTTGAAGGGGTTGACATCATAGAGATATGGGATCTCCCTCCAGGTCCTTCAAGCTTCCATGGTGAAAGTGTACAATGA 1185 0.4295 MKFKLIVIMESSDLSNNQLEGDIPVNGSFQLFTPLSFGDNPHLRPIDLTPGPVLPTPLGNSSTGVIAAGVGAVAVVFTASAIALAYYYWKRIPLAYCWKRGPPYYAFDVYDEEELEAHFGQLKKFPLCELQVATDSFNSKNILGRGGFGKVYKGRLNDGSLVAVKRLKKEGAQGGELQFLTEVKMISLAVHRNILRLHGFCMTPTERLLVYPFMANGSVASCLRDRSKSKPLLEWPVRKRIALGAARGLAYLHDDCDPKIIHRDVKAANILLDDEYEAVVGDFGLQNLWSTKILMLPQLGLFDLARRAVDDIVLILDWENLSMPSFHLLPFLPVSYPLFLSLPLINYKRTVSGPKPGSLPVTLTSIREMVEGVDIIEIWDLPPGPSSFHGESVQ 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1943 394 ProSitePatterns Protein kinases ATP-binding region signature. 143 165 IPR017441 GO:0005524
Lele15g1943 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Lele15g1943 394 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 292 - -
Lele15g1943 394 SUPERFAMILY Protein kinase-like (PK-like) 116 291 IPR011009 -
Lele15g1943 394 SMART serkin_6 137 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1943 394 Gene3D Transferase(Phosphotransferase) domain 1 214 300 - -
Lele15g1943 394 FunFam Somatic embryogenesis receptor kinase 1 106 213 - -
Lele15g1943 394 Pfam Protein kinase domain 138 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1943 394 Gene3D Phosphorylase Kinase; domain 1 106 213 - -
Lele15g1943 394 ProSiteProfiles Protein kinase domain profile. 137 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1943 394 FunFam Os07g0541700 protein 214 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1943 Lele-ChrLele15 12155083 12161120 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1943 6 380 Receptor kinase-like Gene Family AT4G33430 49.289 1.36e-112 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele15g1943 Pkinase 6.1e-30 CL0016