Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1941 ATGGAGGCTCTTATCTCAGACTTTGGCATGGCTAGAATCATAGATCCGGATACTTCTAATCAAACTCTTGTAGTTGGTACTTATGGTTATATTGCTCCAGAACTTGCATATACTCTAGTTGTGATTGAAAAGTGCGATGTTTATAGTTTTGGAGTGGTGACACTAGAAACAATGATGGGAAGACATCCTGGAGATCTGATATCGTCTCTATCAAAGACCTATAATGGAAGTATTTTGCTAAAAGATGTCTTAGACGAACGTCTTCCGATGCCAGAACAGAGAGATGCAGGAGATGCGACACTTTTGGTGACAATAGCATTAGCATGCTTGAATCCATCTCCCAAATCTCGACCATCAATGCAACAGGTGTCCCAAAGGCTTGTATCCTCCAACGTGCCATTAGCCATTCCTTTCAATAATATCTCACTCCAGCATCTAGCGAATCAAGATATGCAAATAAGCTAA 465 0.4065 MEALISDFGMARIIDPDTSNQTLVVGTYGYIAPELAYTLVVIEKCDVYSFGVVTLETMMGRHPGDLISSLSKTYNGSILLKDVLDERLPMPEQRDAGDATLLVTIALACLNPSPKSRPSMQQVSQRLVSSNVPLAIPFNNISLQHLANQDMQIS 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1941 154 Pfam Protein kinase domain 5 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1941 154 PANTHER LEUCINE RICH REPEAT KINASE 2 1 131 - -
Lele15g1941 154 Gene3D Transferase(Phosphotransferase) domain 1 1 137 - -
Lele15g1941 154 SUPERFAMILY Protein kinase-like (PK-like) 2 136 IPR011009 -
Lele15g1941 154 ProSiteProfiles Protein kinase domain profile. 1 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1941 Lele-ChrLele15 12138126 12138703 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1941 1 130 Receptor kinase-like Gene Family AT1G15530 37.410 8.88e-21 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele15g1941 Pkinase 1.2e-13 CL0016