Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1939 ATGGTCATTATGGAATCTAGGGATCTTTCAAATAACCAGCTAGAAGGAGACATCCCTGTCCATGGCTCATTTCAATTGTTTACTCCACTCAGTTTTGGAGACAATCCTCATTTAAGACCAATAGACCTTACACCTGGACCAGTTTTGCCAACACCTCCAGGCAATAGTGCAACTGGAGTTATTGCTGCAGGAGTTGGTGCTGCTGCTGTGGTGTTTACAGCCTCTGCAATTGCACTTGCTTATTATTACTGGAAAAGGATTCCACTTGCTTACTGCTGGAAAAGGAGACCACCATATTATGCCTTTGATGTTTATGATGAGGAGGAGCTTGAAGCTCACTTTGGTCAGCTTAAAAAGTTTCCCCTGTGTGAGCTTCAAGTTGCAACAGACAACTTTAATAACAAAAACATTCTGGGTAGAGGTGGATTTGGTAAGGTTTATAAAGGACGGTTGAATGATGGATCTTTAGTTGCAGTGAAAAGACTTAAAAAGGAAGGTGCTCAGGTTGGAGAGCCGCAATTTCTAACAGAAGTAAAAATGATCAGCTTGGCTGTCCATCGTAATTTGCTCCTGCTTCATGGTTTTTGCACGACTCCAACTGAACGGTTGCTTGTACCGCTCTAA 624 0.4247 MVIMESRDLSNNQLEGDIPVHGSFQLFTPLSFGDNPHLRPIDLTPGPVLPTPPGNSATGVIAAGVGAAAVVFTASAIALAYYYWKRIPLAYCWKRRPPYYAFDVYDEEELEAHFGQLKKFPLCELQVATDNFNNKNILGRGGFGKVYKGRLNDGSLVAVKRLKKEGAQVGEPQFLTEVKMISLAVHRNLLLLHGFCTTPTERLLVPL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1939 207 FunFam Somatic embryogenesis receptor kinase 1 101 207 - -
Lele15g1939 207 ProSiteProfiles Protein kinase domain profile. 132 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1939 207 SUPERFAMILY Protein kinase-like (PK-like) 109 205 IPR011009 -
Lele15g1939 207 Gene3D Phosphorylase Kinase; domain 1 101 206 - -
Lele15g1939 207 ProSitePatterns Protein kinases ATP-binding region signature. 138 160 IPR017441 GO:0005524
Lele15g1939 207 Pfam Protein kinase domain 133 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1939 207 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1939 Lele-ChrLele15 12113654 12115400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1939 1 205 Receptor kinase-like Gene Family AT4G33430 55.238 1.52e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele15g1939 Pkinase 2.8e-10 CL0016