Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1938 ATGGAGCACGCAGATACTCATGTTACCACAGCTGTGCGTGGTACAATTGGGTACATTGCCCCAGAATACCTCTCAACTGGAAAGTCTTCAGAGGAGACTGATGTTTATGGTTATGGTGTAATGCTTCTTGAACTAATTACTGGACAGAGGGCTTTTGATCTTGCACGACGTGCCGTCTACGATAATGTCTTGTTACTTGATTGGGTGAAAGGGCTTTTGAAAGACAAGAGATTGGAAATACTAGTTTATGCTGATTTGTGCGGTAACTATAATGAAGAGGAGGTAGAGCAACTAATCAAACTGGCCTTGCTCTGCACACAATGCTCGGCCACGGAAAGACCAAAGATGCCTGAGGTGGTGCGGATGCTTGAAGGTGATGGTTTGGCTGAAAAATTGGATCAATGGCAGAAAGACAAGATGTATCGGCGAGATAATCAAACCCTTCTCCCTAATGATAATTGGCCGATTGTCGACTCGGCATCACATATCCCCCCAGATGAACTCTCAGGTCCCAGATGA 519 0.4528 MEHADTHVTTAVRGTIGYIAPEYLSTGKSSEETDVYGYGVMLLELITGQRAFDLARRAVYDNVLLLDWVKGLLKDKRLEILVYADLCGNYNEEEVEQLIKLALLCTQCSATERPKMPEVVRMLEGDGLAEKLDQWQKDKMYRRDNQTLLPNDNWPIVDSASHIPPDELSGPR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1938 172 Pfam Protein kinase domain 9 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1938 172 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 4 136 - -
Lele15g1938 172 ProSiteProfiles Protein kinase domain profile. 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1938 172 MobiDBLite consensus disorder prediction 152 172 - -
Lele15g1938 172 Gene3D Transferase(Phosphotransferase) domain 1 1 143 - -
Lele15g1938 172 SUPERFAMILY Protein kinase-like (PK-like) 5 144 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1938 Lele-ChrLele15 12111982 12113475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1938 1 172 Receptor kinase-like Gene Family AT4G33430 70.286 2.05e-75 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele15g1938 Pkinase 1.1e-09 CL0016