Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1937 ATGTTTCTGATATATGAATACATGGAGAGAGGAAGCCTTTTTTATGTGTTGAATAATGATGAAGAAGCAAAAGAGTTGGATTGGAGTAAGAGGGTGAATGGCATCAAAGGAATAGCAAATGCTCTATTCTACATGCATCATCATTGTGCTCCACCAATTATCCATAGAGACATAACAAGTAGCAACGTATTGCTGAACTCAAGGATGGAGGCTCTTGTATCAGACTTTGGCACGGCCAGAATCATAGATCCGGATACTTCTAATCAAACTCTTGTGGTTGGTACTTATGGTTATATTGCTCCAGAGCTTGCATACACTCTAGTTGTGACTGAAAAGTGCGATGTTTATAGTTTTGGAGTGGTTACACTAGAAACAATGATGGGAAGACATCCTGGAGATCTGATATCGTTTCTGTCAAAGACTTGTACTAAAAGTATTTTGCTAAAAGATATTTTAGATGCACGTCTTCCATTGCCAGAACGGAGAGATGCAGAAGATGTGACAGTTTTGGTGACAATAGCATTAGCATGCTTGAATCTATCTCCCAAATCTCGACCTTCAATGCAACAAGTGTCCCAAAGACTTCTTGCATGCACCTTGGTTGTAACTGAAAAATGTGATGTTTATGGTTTTGTTGTTGTGACATTAGAAACAGTCATGGGAAACATCCTAGAGATCGGATATCATGCACTAGATGTTACTCTTTCGACCACAGTAGCATTAGCATGCCAGAATCCATCTCCAAGATCTCGACCACCAATGCAGCAAGTGTCTCAAAGGCTTTTATCCTCCAACCTGTCATTAGCCATTCCTTTCAACGAGCTACAAACCCCACGCGTTGCACGGGATGATTTCACAATAATGCAACATTCTATGGCATCTCATGAGTGTCCATTACACATACATCAACACTCCTAA 918 0.4031 MFLIYEYMERGSLFYVLNNDEEAKELDWSKRVNGIKGIANALFYMHHHCAPPIIHRDITSSNVLLNSRMEALVSDFGTARIIDPDTSNQTLVVGTYGYIAPELAYTLVVTEKCDVYSFGVVTLETMMGRHPGDLISFLSKTCTKSILLKDILDARLPLPERRDAEDVTVLVTIALACLNLSPKSRPSMQQVSQRLLACTLVVTEKCDVYGFVVVTLETVMGNILEIGYHALDVTLSTTVALACQNPSPRSRPPMQQVSQRLLSSNLSLAIPFNELQTPRVARDDFTIMQHSMASHECPLHIHQHS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1937 305 Pfam Protein kinase domain 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1937 305 FunFam MDIS1-interacting receptor like kinase 2 8 197 - -
Lele15g1937 305 ProSitePatterns Tyrosine protein kinases specific active-site signature. 53 65 IPR008266 GO:0004672|GO:0006468
Lele15g1937 305 ProSiteProfiles Protein kinase domain profile. 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1937 305 SUPERFAMILY Protein kinase-like (PK-like) 2 195 IPR011009 -
Lele15g1937 305 Gene3D Transferase(Phosphotransferase) domain 1 1 201 - -
Lele15g1937 305 PANTHER LEUCINE RICH REPEAT KINASE 2 196 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1937 Lele-ChrLele15 12105153 12108350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1937 2 195 Receptor kinase-like Gene Family AT2G35620 43.137 2.75e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele15g1937 Pkinase 9.6e-28 CL0016