Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1935 ATGAGGAGGGGTTTCATGTGCCACTCTCAGGCATCAACTGCAGTGTGCATGAGCACAGGCGACCGCAGGTCTGTGGTAGTGCCTAGAAGGCCTGACAGAAGCATTTCTCTTGATGATACCAGACTCATCAACAATCCCAAGTACTCCAGACTTGTTGAGCCTCGCAGGTTCGAGCCTGCTGATAAGAAAGCCTTGTCTATTGCTGTACCAAAGATCAAGCAAAAGAGGGAGCGAGTTCAAGATCAAGAAAAGGAGCCAAGGGCATTTCATCAAACACTTACTGATCAAGTCTTTCAGGTGGTTGTGATGAAGGTGGCCCTTCATTGTCAAGGTTGTGCTGGCAAAGTTAAAAAGCATCTCTCTAAAATGGAAGGGGTGACATCTTTCAACATAGAGTTGGAGACGAAGAGGGTGACAGTGATGGGACACATATCACCTGCGGGAGTGCTTGAGAGCGTCTCCAAGGTCAAAAGGGCTGAGTTCTGGCCTTGCTGA 495 0.4848 MRRGFMCHSQASTAVCMSTGDRRSVVVPRRPDRSISLDDTRLINNPKYSRLVEPRRFEPADKKALSIAVPKIKQKRERVQDQEKEPRAFHQTLTDQVFQVVVMKVALHCQGCAGKVKKHLSKMEGVTSFNIELETKRVTVMGHISPAGVLESVSKVKRAEFWPC 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1935 164 CDD HMA 97 155 IPR006121 GO:0046872
Lele15g1935 164 SUPERFAMILY HMA, heavy metal-associated domain 97 157 IPR036163 GO:0046872
Lele15g1935 164 Pfam Heavy-metal-associated domain 102 155 IPR006121 GO:0046872
Lele15g1935 164 PANTHER OS08G0405700 PROTEIN 5 164 IPR044526 -
Lele15g1935 164 Gene3D - 97 160 - -
Lele15g1935 164 ProSiteProfiles Heavy-metal-associated domain profile. 99 156 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1935 Lele-ChrLele15 12079212 12081567 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1935 15 12079212 12081567 Lele16g1962 16 11945799 11947685 CCT
Lele14g0462 14 16228851 16239601 Lele15g1935 15 12079212 12081567 CCT
Lele15g1925 15 11990080 11997317 Lele15g1935 15 12079212 12081567 CCT
Lele16g1954 16 11904595 11912661 Lele15g1935 15 12079212 12081567 CCT
Lele15g1935 15 12079212 12081567 Lele15g1935 15 12079212 12081567 ECH
Lele13g0549 13 17728997 17729719 Lele15g1935 15 12079212 12081567 hybridization
Lele14g0452 14 16170478 16173019 Lele15g1935 15 12079212 12081567 hybridization