Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1934 ATGCAACTTCGTTGGTTCTCTGCTTCTCAATCTTTCGGTATCTCACTGTTTCTTCTCATTCGTCTCATTTGTCGTGTTAGCGACGAGCTTGTGAAAGTGAAGGCAATGGAGGAAATAGGAAGAGGTAATAATGGTTCAAGTCATATGAATGAAGATCATACTTTGAATATTCAAAAGGTGGGAGCTCCTCCAAAGCAAAAGCTTGTGAAGGAGATTAAATATGCAGTAAGGGAGACTTTCTTCTCAGACAATCCTTTTCGCCATTTTAAAGACCAGTCAAGATCAAGGAAGCTTGTTCTTGGACTTCAAGCAGTTTTCCCAATCCTTGAATGGGGAAGAGATTACAGTTTTCATAAATTCAGAGGTGATCTTGTCTCTGGACTTACCGTTGCTTCTCTCTGTATTCCTCAGGATATTGCATATGCAAAGCTTGCAAATCTGGATCCTCAATATGCACTATACTCAAGCTTTGTGACTCCTCTGGTGTATGCTTTCATGGGAAGCTCAAGAGATATTGCCATAGGACCAGTTGCTGTGGTGTCCCTCTTGCTTGGAAGCATGCTCACTGATGAGATTAGTGACTATAAGAATCATGATTATCTCCGTCTCGCTTTCACTGCCACCTTCCTTGCAGGAATCACTCAACTGGCCCTAGGGATTTTCAGACTAGGTTTCTTGATTGATTTCCTATCTCAAGCTGCCATAGTGGGATTCATGGCTGGAGCTGCCATTACTATTAGCCTACAACAGCTCAAAGGGCTACTTGGCATTGTCCATTTCACCAAGAAGACCGATATCAGTTCCGTCCTGCACTCAGTTTTTAGTACAGCAAGCCATGGGTGGAACTGGCAGACTATAGTCATAGGAGTATCATTCTTGATCTTCCTTCTAGCAAGCAAGCAAATTGCTAAAAAGAACAAGAAGTTCTTCTGGCTGTCTGCAACTGCTCCCTTGATCTCTGTTGTCCTGTCAACCTTTTTCGTCTATATTACTCACGCTGACAAAAAAGGAGTCTCGATTGTGAGGCATATAAAAAAAGGTGTGAACCCAATATCAGCTAATGAAATATTCTTCAGTGGGAAGTATCTTGGCCCCGGCATTCGGATTGGTGTGGTGTCTGGTGTGATAGCACTCACGGAAGCCATAGCAATTGGGAGAACTTTCTCTGCCATGAAAGACTATTCACTTGATGGAAACAAAGAAATGGTAGCAATAGGAACAATCAATGTTATTGGATCACTTACTTCTTGTTATGTATCTTCAGGATCTTTTTCTCGCTCGGCGGTGAACGTCATGGCTGGTTGTAATACTGCTGTGTCAAACATAGTTTTGTCCATAGTTGTATTGCTAACTCTGGAACTCATTACACCATTATTCAAGTACACCCCAATTGCTGTGCTGTCTTCCATTATCATTGCTGCTGTAAGTGGCCTTGTTGACATAGAAGCTGCTGTTCTGCTTTGGAAGGTTGACAAATTTGACTTTGTCACATGCATGGGAGCCTTCCTTGGTGTCATTTTCAAGAATGTTGAGATTGGCCTTCTAATTGCTGTGGTTATATCTTTTGCAAAGATCCTTTTACAAGTAACAAGGCCAAGAACAGCAGTACTTGGGAGGGTTCCAGAAACTTCAGTTTATAGGAACATTCAACAATATCCAAAAGCAACACAGGTTCCTGGAATGCTGATTATCAGAGTTGATTCTGCAATCTACTTCTCAAACTCCAACTACATTAAGGAGAGAATTCTGAGATGGCTCGCTGATGAAGATGCAAACAAGAAAGAAAACAAACTACCGAGAACAGAATATCTTATTGTAGAAATGTCTCCTGTAACTGACATTGACACTAGTGGCATCCGTGCCTTTGAAGAGTTGTACAAGAGCCTTCAGAAGAGAAAGGCCCAGCTTGTGTTGGCAAACCCTGGGACAGTAGTAATGGAGAAGCTTCAGGCATCAAAATTCACAGACTTAATTGGGGAAGATAACATTTTTCTTACAGTGGCTCATGCTGTTGCTACCTTTGGTCCCAACATTGAATTACCCTAA 2046 0.4184 MQLRWFSASQSFGISLFLLIRLICRVSDELVKVKAMEEIGRGNNGSSHMNEDHTLNIQKVGAPPKQKLVKEIKYAVRETFFSDNPFRHFKDQSRSRKLVLGLQAVFPILEWGRDYSFHKFRGDLVSGLTVASLCIPQDIAYAKLANLDPQYALYSSFVTPLVYAFMGSSRDIAIGPVAVVSLLLGSMLTDEISDYKNHDYLRLAFTATFLAGITQLALGIFRLGFLIDFLSQAAIVGFMAGAAITISLQQLKGLLGIVHFTKKTDISSVLHSVFSTASHGWNWQTIVIGVSFLIFLLASKQIAKKNKKFFWLSATAPLISVVLSTFFVYITHADKKGVSIVRHIKKGVNPISANEIFFSGKYLGPGIRIGVVSGVIALTEAIAIGRTFSAMKDYSLDGNKEMVAIGTINVIGSLTSCYVSSGSFSRSAVNVMAGCNTAVSNIVLSIVVLLTLELITPLFKYTPIAVLSSIIIAAVSGLVDIEAAVLLWKVDKFDFVTCMGAFLGVIFKNVEIGLLIAVVISFAKILLQVTRPRTAVLGRVPETSVYRNIQQYPKATQVPGMLIIRVDSAIYFSNSNYIKERILRWLADEDANKKENKLPRTEYLIVEMSPVTDIDTSGIRAFEELYKSLQKRKAQLVLANPGTVVMEKLQASKFTDLIGEDNIFLTVAHAVATFGPNIELP 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1934 681 ProSiteProfiles STAS domain profile. 551 674 IPR002645 -
Lele15g1934 681 SUPERFAMILY SpoIIaa-like 553 675 IPR036513 -
Lele15g1934 681 Gene3D STAS domain 531 675 IPR036513 -
Lele15g1934 681 CDD STAS_SulP_like_sulfate_transporter 552 667 - -
Lele15g1934 681 Pfam Sulfate permease family 120 499 IPR011547 GO:0016020
Lele15g1934 681 Coils Coil 619 639 - -
Lele15g1934 681 FunFam Sulfate transporter 31 531 677 - -
Lele15g1934 681 Pfam STAS domain 552 670 IPR002645 -
Lele15g1934 681 PANTHER SULFATE TRANSPORTER 69 672 IPR001902 GO:0016020|GO:0055085
Lele15g1934 681 TIGRFAM sulP: sulfate permease 107 670 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1934 Lele-ChrLele15 12066706 12073007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1934 47 678 Inorganic Solute Cotransporters AT1G22150 70.142 0.0 884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1934 15 12066706 12073007 Lele15g1934 15 12066706 12073007 ECH
Lele13g0550 13 17738357 17744439 Lele15g1934 15 12066706 12073007 hybridization