Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1933 ATGAATCTTTCATCTTCATGCTTATCGTCATCATCTTCTTCAGTTCTTCCACTGTCAAATAAATGGTTATCATCATCATCAAGGCCTGCGAGGGTTTCTGTGATTTCATGTTCTTCTTCAACCACCACCATGAATACTGGTAATAAGACCTGCAACTTCTACAAGCTTCTGTCTCTGAGCTCAGAGGCTGCATCCATGACGGAGATCAAGCAGGCTTACCGGTCTATGGCGCTTCGGTACCACCCCGACGTGTGCCGGGACACCACCGCAAAGGAGGAGTGGACGAGGCTGTTTGTGCAGCTTAATACTGCGTATGAGACGCTGTCAAATCCTCAGCTTCGTCAAGAGTATGACTACAACGTTCTGGGATTGGGGAGGATGATGGCAGCGCCGGCGATTGTTGAGATCAGAAATGATGAGATCGGGTTGAGAAAGAGTAGGTCTGAGGACCAGAAGAGATCAAGATCTAACAGAAGTTCCATGAGAACTCAAAGGATGAAACATCGCAATTGA 513 0.4717 MNLSSSCLSSSSSSVLPLSNKWLSSSSRPARVSVISCSSSTTTMNTGNKTCNFYKLLSLSSEAASMTEIKQAYRSMALRYHPDVCRDTTAKEEWTRLFVQLNTAYETLSNPQLRQEYDYNVLGLGRMMAAPAIVEIRNDEIGLRKSRSEDQKRSRSNRSSMRTQRMKHRN 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1933 170 CDD DnaJ 52 110 IPR001623 -
Lele15g1933 170 Gene3D DnaJ domain 38 134 IPR036869 -
Lele15g1933 170 Pfam DnaJ domain 52 118 IPR001623 -
Lele15g1933 170 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Lele15g1933 170 ProSiteProfiles dnaJ domain profile. 52 121 IPR001623 -
Lele15g1933 170 SMART dnaj_3 51 113 IPR001623 -
Lele15g1933 170 MobiDBLite consensus disorder prediction 144 170 - -
Lele15g1933 170 SUPERFAMILY Chaperone J-domain 44 121 IPR036869 -
Lele15g1933 170 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 12 157 - -
Lele15g1933 170 PRINTS DnaJ domain signature 73 88 IPR001623 -
Lele15g1933 170 PRINTS DnaJ domain signature 93 113 IPR001623 -
Lele15g1933 170 PRINTS DnaJ domain signature 55 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1933 Lele-ChrLele15 12065906 12066418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1933 49 118 C2H2 Transcription Factor Family AT1G74250 40.278 1.19e-06 45.8