Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1931 ATGGCAGGTGCTATGTTGAATGGGTTGGGTTCTTCCTTCTTGTGTGGAGGAAAGAGAAGCCAATCTCTTTTCTCTGCTAAATCTAATAATATCAATGCTGTTAGCTCTAAGAGGTTCTTTGTTGCTGCTGCTGCTGCTGCTCAACGAAAGAAATCTTGGATCCCTGCTGTTAAAGGTGGTGGCAACTTCATCGACCCTGAATGGCTAGATGGCTCGCTGCCAGGTGACTATGGCTTTGACCCTCTTGGCCTAGGCAAGGATCCAGCATTCCTTAAGTGGTACCGAGAAGCAGAGCTCATCCACGGCCGGTGGGCGATGGCTGCGGTTGTCGGAATCTTTGTTGGGCAGGCATGGAGTGGAGTTCCATGGTTTGAGGCCGGAGCTGACCCGAATGCCATTGCTCCTTTTTCCTTTGGTTCACTTCTGGGCACACAGTTGCTGCTCATGGGTTGGGTAGAGAGCAAGAGGTGGGTGGACTTCTTCAATCCTGATTCACAATCAGTGGATTGGGCCACGCCATGGTCTAGAACCGCCGAGAACTTCGCCAACGCTACCGGCGAGCAGGGTTACCCCGGAGGCAAATTCTTTGACCCATTAGGGTTTGCAGGCAAAATCAAGGATGGGGTTTACATTCCTGACAGAGAAAAGCTGGAAAGACTCAAACTTGCTGAGATCAAGCATGCTAGGATTGCTATGTTGGCTATGCTTATCTTCTACTTTGAAGCTGGACAAGGCAAAACGCCCCTTGGTGCGCTTGGCTTGTAA 765 0.5046 MAGAMLNGLGSSFLCGGKRSQSLFSAKSNNINAVSSKRFFVAAAAAAQRKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVDWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGKIKDGVYIPDREKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1931 254 Pfam Chlorophyll A-B binding protein 66 242 IPR022796 -
Lele15g1931 254 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 45 252 IPR001344 GO:0009765|GO:0016020
Lele15g1931 254 FunFam Chlorophyll a-b binding protein, chloroplastic 66 253 - -
Lele15g1931 254 SUPERFAMILY Chlorophyll a-b binding protein 62 254 - -
Lele15g1931 254 Gene3D Chlorophyll a/b binding protein domain 66 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1931 Lele-ChrLele15 12027440 12028672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1931 1 254 Chloroplast and Mitochondria Gene Families AT1G15820 81.102 2.29e-151 420
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g1964 16 11976261 11979432 Lele15g1931 15 12027440 12028672 CCT
Lele13g0567 13 17859346 17870802 Lele15g1931 15 12027440 12028672 CCT
Lele15g1931 15 12027440 12028672 Lele15g1931 15 12027440 12028672 ECH
Lele13g0552 13 17766741 17768610 Lele15g1931 15 12027440 12028672 hybridization
Lele14g0454 14 16202813 16204093 Lele15g1931 15 12027440 12028672 hybridization