Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1913 ATGGCAAGCCATAAAGAGAATACTAAGCAACAAACACTTGAAGCTATGCTGAAATACAAGAAGTTCAGAAAGCCAAATAAAGGGGAGGCACTAATGATCTGCCGCAAGTGCAGGGGAGAGTTTTATGTGCCCTCATCCACAACCACATATCGATGCCCTCTGTGCAAAACAATCAATAATGGGCAGTCAAATAAAGATAGAAGCAATGGAATAGGGTTGCTGAAATTTGATACTATTGATGATATGTCACAGAATGCTAGCAAAAGTGCGTATGTTCTGAATCAAAGGCCTTCTTCATTTTCTTTGATTCGCTCTTCCTTCTTATCCAGACGAAGCAATAAGCGCGCGGTTCTTTGTGGAGTTACTTACAGGAAAACGGACAGACTCAAAGGGACCATCAATGATGTTGTGAACATGAGGGAGCTTCTGGTGAAGGTTTTTGACTTTCCTACTGAATGCATACATGTGCTCACAGAAGAGCAAAAGAGTCCAGATTTAGTTCCAACAAAGAAAAACATACTTGAAAATTTGAAGTGGCTTGTGGAAGGCTGCCAGAAAGGAGACTCACTCGTGTTTTACTTCTCAGGACATGGCTTTCAACACATAGATTCCAAAGAAGATGAGATAGATGGGATGGATGAAAGCATTTGTCCGGTCGATTTCTTGCGAGAAGGGGCGATTCTCGATGATGATATAAATTCAATCCTTGTTTGGCCCCTCAAAGAAGGTGTCACACTTCATGCCATTGTTGATGCTTGTCATAGTGGAACAATTCTTGATCTATCATATGTCTATGACCCTCTAAAATGCATATGGAAAGATAACAAGCCTCCTGCCAAAGAACCTTCTAGAAAGCATCCGAATGTGGGGCTGGCAATTTGTATCAGTGCTTGTGAAGATCATCAGATGGCTGCTGATACCTTAGTTTTCGGTGGGAAGGGAATGAATAATGGTGTTATGACCTATCTTTTCACAAAAGTCATGAGAAAATATCCTGATATAACATATGGGGATTTACTGGAACAGATTGGGAAGGAAATTGAAGAGACTAAGCGAAATTTTTGTCCATCTTTTTTGCGAAATATGTTTCCTCTCAAAATTGAGCAGGATCTTGTTATTTCATCTTCTCAAGAGTTCGATGTTTCTAGGGCTATATTCAAATTATGA 1167 0.401 MASHKENTKQQTLEAMLKYKKFRKPNKGEALMICRKCRGEFYVPSSTTTYRCPLCKTINNGQSNKDRSNGIGLLKFDTIDDMSQNASKSAYVLNQRPSSFSLIRSSFLSRRSNKRAVLCGVTYRKTDRLKGTINDVVNMRELLVKVFDFPTECIHVLTEEQKSPDLVPTKKNILENLKWLVEGCQKGDSLVFYFSGHGFQHIDSKEDEIDGMDESICPVDFLREGAILDDDINSILVWPLKEGVTLHAIVDACHSGTILDLSYVYDPLKCIWKDNKPPAKEPSRKHPNVGLAICISACEDHQMAADTLVFGGKGMNNGVMTYLFTKVMRKYPDITYGDLLEQIGKEIEETKRNFCPSFLRNMFPLKIEQDLVISSSQEFDVSRAIFKL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1913 388 Gene3D - 58 388 - -
Lele15g1913 388 Pfam Caspase domain 114 361 - -
Lele15g1913 388 PANTHER METACASPASE-4 111 381 - -
Lele15g1913 388 SUPERFAMILY Caspase-like 117 350 IPR029030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1913 Lele-ChrLele15 11875892 11878254 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0583 13 18053617 18058717 Lele15g1913 15 11875892 11878254 CCT
Lele13g0572 13 17899724 17901788 Lele15g1913 15 11875892 11878254 hybridization
Lele14g0475 14 16369780 16378502 Lele15g1913 15 11875892 11878254 hybridization