Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1898 ATGGCTTCCCTTCTTCATCCACCTATAGCACCAGATAATAGCTCTAAAGTTGTAGAACTACAAACCAGTCTAGACTTCATTACTCCACTTGAGAACACGGCGATCAAGCAGACATATAGAAGCAAAGGTACTCAGAGAGAGGACGAGGGCGTTTTCATGACATGGGAAGACTTGTGGGTCACTGTTGGAAGTGGAAAGAATAAAAAGCCTATATTGCAGGGTCTGACTGGGTATGCCAAGCCAGGACAGCTTCTGGCCATAATGGGTCCTTCGGGATGCGGCAAAACCACACTCCTTGATGCTTTAGCAGGAAGATTGGGTTCAAACATGCAGCAAACAGGGAAGATTCTAATCAATGGGCACAGACAAGCACTAGCATATGGAACATCAGCATATGTCACCCAAGATGATGCTATGTTGTCGACCTTAACAGCCGGGGAAGCTTTATATTACTCATGTCAGCTACAACTTCCAGATTCCATGTCCATGGAAGAGAAGAAGGAGAGAGCTGACTCTACACTCAGAGAAATGGGTCTACAAGATGCCATCAACACAAGGATTGGAGGATGGGCTTCAAAAGGCCTTAGCAGTGGACAAAAGAGAAGACTTAGCATTTGCATCGAGATTATAACACGCCCTAAACTTCTCTTCCTTGATGAACCAACTAGTGGGCTTGATAGTGCAGCTTCTTCTTATGTTATGAGCAGAATTGCCAGTCTCAACATAAGTGATGGCATTCAGAGAACAATTGTAGCATCTATCCACCAGCCTAGCAGTGAAGTTTTTCAACTTTTCCATAATCTCTGTCTTCTGTCTTCCGGTGAAACGGTATATTTTGGCCCTGCATCAGAGGCAAATGAGTTCTTTGCTTCAAATGGTTTTCCTTGCCCAAGTCTCTACAATCCTTCTGATCATTTCTTAAAGATCATAAACAAGGATTTTGAGCAGAATCCTGAAGAAGGCTTTGGTAAAGGAGTAACCACAGAAGACGCGATTGATATACTTGTAGAGTCCTATAAGTCATTTGAAATTCGCAAACAAATTCTGAAAGAAGTGGGAGAAATAAGCGAAAGTGATTCTGATGCGATAGGGAAAAAGAGAATACATTCTGCATTCCTTACCCAGTGCCTTGTTCTTATAAGAAGATCTTCCCTGCATATGTACCGTGACATGAGCAATTACTGGTTACGTCTTTCTGTATATGTTGCAATAGCTATAAGTCTGGGTACCATATTCTATAACATGGGCTCAGGTATTGAATCTATTCAGGCTAGAGGATCGCTGCTCACATTTTTTATTTCAGTCCTTACTTTCATAACCCTTATTGGTGGATTCCCTCCATTTTTAGAGGAAATGAAGATATTTAAACGAGAGAGATTGAATGGACACTATGGCGTTACTGCTTTTCTGATTGGCAACACATTATCTGCTATTCCATACATGCTACTGATATCTCTGATACCTGGAGGAATAGTTTATTGCCTTTCTGGGCTGCACAAAGGGATTGGACACTTTTTGTATCTGACGTCTGTATTGTTTGCCACTGTTATGTCTGTTGAGAGCCTCATGATGGTTGTTGGGAGCTTCTTCCCCAATTTCATAATGGGGATGATCATTGTCGGTGGAATTCAAGGAGTCGTGATATTACTTGGTGGTTTCTATAGACTGCCAAACGATCTCCCCGAGCCATTTTGGAGATATCCTTTATATTATGTTTCATTCCATAAGTATGCCTTCCAAGGGTTGTTCAAGAATGAATTTGAAGGTTTAACATTTGCCACCGATCATGATGGAGGCAACAAAACCACTAGTGGTGGAGAAATTCTGAAAAACACATGGCAAGTGGAAATGGGCTACTCTAAGTGGGTTGATCTTGCCATCTTGCTCGGAATGATTGTTCTATATAGGCTTCTGTTCTTGGCCATTACTAAGACCAAGGAGAATGCAAAGCCAGCGGTTGCAGCTATCGGTTGTCCCCCAAACAAAATTATGGTGACCCGGAGAAATTAG 2010 0.4209 MASLLHPPIAPDNSSKVVELQTSLDFITPLENTAIKQTYRSKGTQREDEGVFMTWEDLWVTVGSGKNKKPILQGLTGYAKPGQLLAIMGPSGCGKTTLLDALAGRLGSNMQQTGKILINGHRQALAYGTSAYVTQDDAMLSTLTAGEALYYSCQLQLPDSMSMEEKKERADSTLREMGLQDAINTRIGGWASKGLSSGQKRRLSICIEIITRPKLLFLDEPTSGLDSAASSYVMSRIASLNISDGIQRTIVASIHQPSSEVFQLFHNLCLLSSGETVYFGPASEANEFFASNGFPCPSLYNPSDHFLKIINKDFEQNPEEGFGKGVTTEDAIDILVESYKSFEIRKQILKEVGEISESDSDAIGKKRIHSAFLTQCLVLIRRSSLHMYRDMSNYWLRLSVYVAIAISLGTIFYNMGSGIESIQARGSLLTFFISVLTFITLIGGFPPFLEEMKIFKRERLNGHYGVTAFLIGNTLSAIPYMLLISLIPGGIVYCLSGLHKGIGHFLYLTSVLFATVMSVESLMMVVGSFFPNFIMGMIIVGGIQGVVILLGGFYRLPNDLPEPFWRYPLYYVSFHKYAFQGLFKNEFEGLTFATDHDGGNKTTSGGEILKNTWQVEMGYSKWVDLAILLGMIVLYRLLFLAITKTKENAKPAVAAIGCPPNKIMVTRRN 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1898 669 FunFam ABC transporter G family member 11 51 338 - -
Lele15g1898 669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 289 IPR027417 -
Lele15g1898 669 Pfam ABC-2 type transporter 374 587 IPR013525 GO:0016020|GO:0140359
Lele15g1898 669 Pfam ABC-2 type transporter 255 357 IPR043926 GO:0140359
Lele15g1898 669 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 42 655 - -
Lele15g1898 669 Pfam ABC transporter 73 223 IPR003439 GO:0005524
Lele15g1898 669 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 53 298 IPR003439 GO:0005524
Lele15g1898 669 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524|GO:0016887
Lele15g1898 669 Gene3D - 51 293 IPR027417 -
Lele15g1898 669 SMART AAA_5 81 270 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1898 Lele-ChrLele15 11690690 11693899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1898 82 233 Calmodulin-binding Proteins AT2G36910 28.049 2.82e-08 55.5