Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1880 ATGGTGTCGCAGATAGTTGAGTTGTTGAAGAATGAGATCCCTCTGGAACAGGAGGCCTTCGTTTTGCCTGAGGATTCTGTGAATGGCCTTGTTCTTGTTGACATCATCAATGGCTTCTGCACTGTTGGTGCTGGAAATCTGGCTCCAACAGAACCGAATATGCAGATTTCAGGGATGATTGAGGAGTCAGAAAGGCTGGCCAGATTGTTCTGTGAGAAGAAACTGCCAATTATGGCGTTTTTGGATTCTCACCACCCAAACAAGCCAGAAGAACCTTACCCTACTCACTGTCTTATTGGCTCTGATGAATCAAACCTGGTTCCAGAATTAAGATGGCTGGAGGGTGAACCAAACGTGACAATAAGGCGTAAAGATTGTTTTGATGGATATTTGGGCTCAATGGAAGAAGATGGCTCTAATGTTTTTGCAGATTGGGTGAAGAACAACAACATCAAAGCTTTGGTGGTTGTAGGAGTGTGCACAGATATATGTGTGCTGGACTTTGTGTGTTCAACCATGTCAGCTAAGAACAGAGGATTTCTGAAGCCTCTGGAGAACGTAGTGGTGTATTCAAATGCATGTGCCACCTTTGATTTCCCTCTTCATGTTGCCAGAAACTTGAAAGGAGCTTTAGCTCATCCTCAGGAGTTTATGCATCATGTGGGTCTGTATATGGCAAAAGAGAGAGGAGCCAAGATTGCCAACCAAGTCTTGTTTGCTGAGGTGGAGCCATGA 735 0.4463 MVSQIVELLKNEIPLEQEAFVLPEDSVNGLVLVDIINGFCTVGAGNLAPTEPNMQISGMIEESERLARLFCEKKLPIMAFLDSHHPNKPEEPYPTHCLIGSDESNLVPELRWLEGEPNVTIRRKDCFDGYLGSMEEDGSNVFADWVKNNNIKALVVVGVCTDICVLDFVCSTMSAKNRGFLKPLENVVVYSNACATFDFPLHVARNLKGALAHPQEFMHHVGLYMAKERGAKIANQVLFAEVEP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1880 244 PANTHER - 1 241 IPR044717 GO:0008936|GO:0019365
Lele15g1880 244 Pfam Isochorismatase family 29 204 IPR000868 -
Lele15g1880 244 Gene3D - 28 220 IPR036380 -
Lele15g1880 244 SUPERFAMILY Isochorismatase-like hydrolases 30 233 IPR036380 -
Lele15g1880 244 CDD cysteine_hydrolases 30 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1880 Lele-ChrLele15 11568083 11570541 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1880 15 11568083 11570541 Lele13g0605 13 18220582 18225758 CCT
Lele15g1880 15 11568083 11570541 Lele14g0503 14 16667227 16673861 CCT
Lele15g1880 15 11568083 11570541 Lele15g1878 15 11556049 11562012 CCT
Lele15g1880 15 11568083 11570541 Lele16g1909 16 11510398 11516930 CCT
Lele13g0603 13 18211324 18213658 Lele15g1880 15 11568083 11570541 hybridization