Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1867 ATGGAGAATTACACGTACCCTTCGTACCCTGACTCAGGCGAGTCGTCTCCTCGCTCCAGAGAGGTTGAATTCGAGAACCCTCCGCCATGGGACGACCAGCAACCGCCGCCCAATTACAAAGCTAAATTCATGTGCAGCTATGGCGGGAAGATCCAGCCTCGTAGCCACGACAACCAGCTCTCCTACGTCGGCGGCGAGACCAAGATTCTCGCCGTTGACCTCAACATCAAGTTCTCCGCCATGATTTCCAAGCTCTCCGCCCTCTACGACGGCGCCGCCGATGTCACCTTTAAGTACCAGCTTCCCGGAGAAGAACTCGATGCCCTGATTTCCGTCACCAACGACGACGATCTAGAGCACATGATGCACGAGTATGATCGGCTGTACCGTGCTTCCGCTAAGCCCGCTCGCATGAGGCTCTTCCTCTTCCCTGCTAATAGTAGTCAGGCTTCGAGTTTTGCGTCCGACCAGGATCGCTTCGTGGAGGCTCTCAACACGGTTCCGGGTCCGACTCCGCCCGACTCGGTTAAGCCGGCTCCTGTTCCTGGCAGCAACGTCGACTTCCTCTTTGGTCTGGAGAAAGGAGTACCTCCGGCGCAGCCACCGCCTGTGGCCGTTAAGTTTCATGACCCTGTTCCTGGACCGGTGGTGCCACCTCTGGAGTACCAAGCAAGAGGTGGCCCTGAACGGGTCATCGGTTCGGATCCTTCTGTGAACCCGATTGAAGTTCAAAGGCAGTTGCAGAGGATGCAAATTGGGGAGCATGATCAGCCTGTGTATAGGAGAAAGAGCGAGGATAATACGGCAGGAGGATATGCAGCCGGAGATTATTATGTTCAGAAATTCGCCGACAAGGCTCCTCCATCGAATTTGCCGGCCACAGGACCAATAGCTGGAGGATATTGGCCGGAAAAGCAAGTTCACAGCGAGGGTTTTCCGCCGATGACGGCGGCAAACGGATCCGGAGGAGCAGACCAGCCGGTTTATGTTATCCCACAGCCTGGAACTTTCTATCACGCGCCGCCGGGGGTGCGTCCTCCGGCGGCAGCACCAGCCACTCAAGGCTACTACGCAGTGCAGCGAATGGTTTCTGACGCCTACCGTGAGCAACCGGTTTACAGTGCCTCAGCAGCGGCGGCCCGAGCGCCATTTTCATCAGCGGCTCCGGCAACCTTGGCCCCACCTCAGCCTGTTAAATCTGCCGCGTATACGGAAGGATTCAACGTTGTTCGCCCAGCTGGTATACCGGATAACTCAGCAGCGTATGCACAGGTGGCGTACGATAGTTCAGCAGGGAGACAGTTTTACTATACTGCGCCGTCAGGAGTGGTGCAGCCGCCGCCACAGTACCAAGGGGCGGTTCCAACGATGGGCGCTGATATAAGAACCGCCGGAGTATCATTGGGTCAAGATCTTAAAGTGGTCAATAAGGTTTCCCAAGGTTAA 1446 0.5636 MENYTYPSYPDSGESSPRSREVEFENPPPWDDQQPPPNYKAKFMCSYGGKIQPRSHDNQLSYVGGETKILAVDLNIKFSAMISKLSALYDGAADVTFKYQLPGEELDALISVTNDDDLEHMMHEYDRLYRASAKPARMRLFLFPANSSQASSFASDQDRFVEALNTVPGPTPPDSVKPAPVPGSNVDFLFGLEKGVPPAQPPPVAVKFHDPVPGPVVPPLEYQARGGPERVIGSDPSVNPIEVQRQLQRMQIGEHDQPVYRRKSEDNTAGGYAAGDYYVQKFADKAPPSNLPATGPIAGGYWPEKQVHSEGFPPMTAANGSGGADQPVYVIPQPGTFYHAPPGVRPPAAAPATQGYYAVQRMVSDAYREQPVYSASAAAARAPFSSAAPATLAPPQPVKSAAYTEGFNVVRPAGIPDNSAAYAQVAYDSSAGRQFYYTAPSGVVQPPPQYQGAVPTMGADIRTAGVSLGQDLKVVNKVSQG 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1867 481 MobiDBLite consensus disorder prediction 302 326 - -
Lele15g1867 481 Gene3D - 61 144 - -
Lele15g1867 481 Pfam PB1 domain 56 144 IPR000270 GO:0005515
Lele15g1867 481 CDD PB1_UP2 44 143 - -
Lele15g1867 481 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 145 - -
Lele15g1867 481 MobiDBLite consensus disorder prediction 1 38 - -
Lele15g1867 481 PANTHER OS05G0427100 PROTEIN-RELATED 9 375 - -
Lele15g1867 481 MobiDBLite consensus disorder prediction 1 15 - -
Lele15g1867 481 SMART PB1_new 55 145 IPR000270 GO:0005515
Lele15g1867 481 SUPERFAMILY CAD & PB1 domains 56 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1867 Lele-ChrLele15 11427657 11429102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1867 39 167 MAP Kinase Kinase Kinase AT5G57610 44.118 1.20e-29 121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0617 13 18350727 18352172 Lele15g1867 15 11427657 11429102 hybridization
Lele14g0518 14 16872343 16873755 Lele15g1867 15 11427657 11429102 hybridization