Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1858 ATGTACATGTATAAATGGCTTTTGGATGAGGCTTGTGCAATTGAAAGTAACATGTTTAAGCTTCTTTCATTTTGGACAGCTATTGGGGCAGCATTTTATTTTGGTGCATTCTTATTCAGAAACATGTATGGCTTCCTTGTTCTTTTCGCCATCGGTGAACTACTTGTTTTTGCCACTCAGGGTCCCGTGAAATATCATTGCTTCAGCTTCTTGTTAATGGCGCCCACAGCAGCTATGCTATTTCTCTGCCATCATGGCAAAAGCCACAAGAACTCTTCTGTCTCAGCACCACAACAACGCTCAAGCTCTGCAACACAAAAATGGTGGGCTGTTAAATTAGACAATCAGGTCTTAAAAGCAGGAGGTTCAGATAACACCCAATGTCTTGTGGATCATAATTCTGATTTGGAAAAGAGAAGTGCCGAGAATCGCCCATATCCTTGGTGGAGTTTTTGGTTCGAAACAGATATCACAGCAGTTCAGCACAATACGATATATAACTTAAGCAGACATATTGAAGTCACTGTCTTAGAAAAAGAAACAAGAGTGCCATCATCAGAATATTCCTCTTCGAAGATTCATTATGAATCTGAGGTACGACAAAGAACTGAAGGCGTCGACGTCGGAGCAGCAAAGAATAGAGCCGAGCAGCGGCTTGCGGTGGCTAGGTTTCAAAGTAGGAGAAGAAAACAAACGTGGAGAAGAAGAGGAAATACTGATCGAAGAATTTGGGGCTTCTGGGTTGCCGTGGAAAAACCCTTAATCCTATTAGCTTTTGAAATTCTGCTTTTTCTGTCGAATGCTATTGCCGAAATGGCTTCGTCGGAGATCGAGGTGGTGTCATCGGACTCTAAAACCCCGAAAACTCCCGATGCACCTCGCGTAGTAGACGTGATCTCTGCCTGTTTTTGTGGGGACTTAGAGAAATTGAGGTGGTTTGTGGAACAAGAAGGTGCCTCCGTTTCTGTACCTGATTCCAATGGCTATTATCCTCTCCAATGGGCGTCCCTTAATAACTACCCAGATATTGTGCAGTATGTCATTAAGCACGGGGGCAATGTGAATGCTACTGATCACATGCAACAGACGGCACTACACTGGGCGGCATTTCGTGGTGCAACTACAGTGGCTGATTTGCTCTTGGAGAAAGGTGCTTGGCTTGAGGCTGCTGATATAAATGGATACAGGGCAGCTCACGTTGCTGCTCAACATGGACAAACAGCTTTCTTAAATCACATCGTTGCAAAGTACAATGCTGACTTTGATGCACCCGATAATGAGGGACGAAGTCCTCTTCATTGGGCTGCATATAAGGGGTTTGCTGATACAATCCGATTGCTTTTATTCCGGGATGCATGCCAAGGGAGACAAGATAAAAATGGTTGTACGCCATTGCACTGGGCTGCACTAGGAGGAAATGCAGAGGCATGCACTGTGCTTGTACACGCAGGCACTAAGAAAGAACTGGTGGTGAAGGATAATGCTGGATTCAACCCTGTACAGCTTGCACATGATAAGGGTCATCGGCATGTCACCCTTTTCCTTTCTAAACAACAGAGATCTCTGAGCAACTGCTGGAAAGACAAAATTTGTAGTGGGAGGGTCACAGATATTGGTTATGCTCCCATTTTATTTTGTATTATAATCTTTGAAATGTTCCTCTTCATCAACTCAGTAGTTGCAGGTTCTAGTTTTCAAAAGATTACTGCTGTTGTTGGTCTTTGGGCTTGGACAGCTCTTTCTCTGGCATTTGGTAGCTTGATTATGTTCTATAGGTGCAGTAGTAAAGATCCTGGTTATATAAAAGGACCCGGAGGTTCAGGTGCTCATAGTGATGCAGAGGATCCTTTATTGAATATTGAACTGAACAGCTCTTCTGTTTGGACAGGAAATTGGTCTCAACTTTGCCCTACCTGCAAGATAATAAGAACTGTCCGATCCAAGCATTGCCCTACTTGTAAGCGTTGTGTGGAACAGTTTGACCACCATTGCCCATGGATATCTAACTGTGTGGGAAAGAGGAACAAAAGGGATTTCTTTATTTTTGTTTGCATGGCAACCATGACATCATTTATTAGCGGTGCTGTTACGGTTCAAAGAATTTGGACATCATCCATAGCATTGTCAGGAGAAACATGGATCCATCATATGTTAGTACAGCATCCTGGTGCTATTGCATTTCTGGTGCTGGACACTTTTATTTTCATTGCTGCTGTAACTTTGACGTCAACACAGGCTTCAATGATAGCTCGGAATATCACCACAAATGAAGTAGCAAACTCTACTCGATATGGGTATCTTCGTGGTCCTGATGGGAAGTTTAGAAATCCATACAACCATGGCTGTAGGAAGAATTGTTCTGACTTCTTTTTTCATGGCTATACAAGTGATGATAATATTGCTTGGCCTCCATTACAGCGGGTGGCAACGTAG 2433 0.4332 MYMYKWLLDEACAIESNMFKLLSFWTAIGAAFYFGAFLFRNMYGFLVLFAIGELLVFATQGPVKYHCFSFLLMAPTAAMLFLCHHGKSHKNSSVSAPQQRSSSATQKWWAVKLDNQVLKAGGSDNTQCLVDHNSDLEKRSAENRPYPWWSFWFETDITAVQHNTIYNLSRHIEVTVLEKETRVPSSEYSSSKIHYESEVRQRTEGVDVGAAKNRAEQRLAVARFQSRRRKQTWRRRGNTDRRIWGFWVAVEKPLILLAFEILLFLSNAIAEMASSEIEVVSSDSKTPKTPDAPRVVDVISACFCGDLEKLRWFVEQEGASVSVPDSNGYYPLQWASLNNYPDIVQYVIKHGGNVNATDHMQQTALHWAAFRGATTVADLLLEKGAWLEAADINGYRAAHVAAQHGQTAFLNHIVAKYNADFDAPDNEGRSPLHWAAYKGFADTIRLLLFRDACQGRQDKNGCTPLHWAALGGNAEACTVLVHAGTKKELVVKDNAGFNPVQLAHDKGHRHVTLFLSKQQRSLSNCWKDKICSGRVTDIGYAPILFCIIIFEMFLFINSVVAGSSFQKITAVVGLWAWTALSLAFGSLIMFYRCSSKDPGYIKGPGGSGAHSDAEDPLLNIELNSSSVWTGNWSQLCPTCKIIRTVRSKHCPTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFVCMATMTSFISGAVTVQRIWTSSIALSGETWIHHMLVQHPGAIAFLVLDTFIFIAAVTLTSTQASMIARNITTNEVANSTRYGYLRGPDGKFRNPYNHGCRKNCSDFFFHGYTSDDNIAWPPLQRVAT 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1858 810 FunFam S-acyltransferase 414 522 - -
Lele15g1858 810 ProSiteProfiles Ankyrin repeat profile. 360 392 IPR002110 GO:0005515
Lele15g1858 810 FunFam S-acyltransferase 282 413 - -
Lele15g1858 810 Gene3D - 277 530 IPR036770 -
Lele15g1858 810 ProSiteProfiles Ankyrin repeat region circular profile. 360 391 - -
Lele15g1858 810 SUPERFAMILY Ankyrin repeat 299 517 IPR036770 -
Lele15g1858 810 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 290 791 - -
Lele15g1858 810 SMART ANK_2a 460 489 IPR002110 GO:0005515
Lele15g1858 810 SMART ANK_2a 360 389 IPR002110 GO:0005515
Lele15g1858 810 SMART ANK_2a 393 423 IPR002110 GO:0005515
Lele15g1858 810 SMART ANK_2a 327 356 IPR002110 GO:0005515
Lele15g1858 810 SMART ANK_2a 427 456 IPR002110 GO:0005515
Lele15g1858 810 ProSiteProfiles Ankyrin repeat region circular profile. 427 448 - -
Lele15g1858 810 ProSiteProfiles Ankyrin repeat profile. 460 492 IPR002110 GO:0005515
Lele15g1858 810 Pfam Ankyrin repeats (3 copies) 390 452 IPR002110 GO:0005515
Lele15g1858 810 Pfam Ankyrin repeats (3 copies) 301 385 IPR002110 GO:0005515
Lele15g1858 810 Pfam DHHC palmitoyltransferase 634 760 IPR001594 GO:0016409
Lele15g1858 810 ProSiteProfiles Ankyrin repeat region circular profile. 460 484 - -
Lele15g1858 810 ProSiteProfiles Ankyrin repeat profile. 427 459 IPR002110 GO:0005515
Lele15g1858 810 ProSiteProfiles DHHC domain profile. 634 684 - -
Lele15g1858 810 ProSiteProfiles Ankyrin repeat profile. 327 359 IPR002110 GO:0005515
Lele15g1858 810 ProSiteProfiles Ankyrin repeat region circular profile. 327 358 - -
Lele15g1858 810 Pfam Ankyrin repeat 460 484 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1858 Lele-ChrLele15 11359055 11377012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1858 328 483 Miscellaneous Gene Families AT3G12360 26.875 4.48e-08 54.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1858 15 11359055 11377012 Lele13g0623 13 18422884 18424905 CCT
Lele15g1858 15 11359055 11377012 Lele14g0530 14 16936483 16938630 CCT
Lele15g1858 15 11359055 11377012 Lele15g1857 15 11352540 11355036 CCT
Lele15g1858 15 11359055 11377012 Lele16g1884 16 11273981 11276255 CCT
Lele13g0622 13 18403096 18418612 Lele15g1858 15 11359055 11377012 hybridization
Lele14g0529 14 16924765 16932287 Lele15g1858 15 11359055 11377012 hybridization