Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1841 ATGTCCGGCACTCCGTCGCATATGAGTTCTTCGGAGAACCCCACTTGGGTATTCGATTACGGTTATTTAGACGACATTCCAGTCCCTGGTGGCGACCTTCCTTCCCTTGAACCGCCAAGTTTTGCTTGGCCCTCTCATTCCCTCACTGCTCCTCCTGCTGATTTCAGTGTGGAGTTGGACGATACCTATGGGAATTCTGATGGTCTTAAGGAACCTGGATCAAGAAAACGCCTAAGGTCAGGATCTGGAAATTCATCTGATTCCAAAGCATGCAGAGAGAAATTGAGGAGGGATCGACTGAATGACAGGCATCTCCGAATCTTCCATCCCCTTTCTATGTTCCTAGAATTGGGTTCTGTCCTTGATCCTGGCAGGCCTGCCAAAGCAGACAAGGCTGTCATATTAAGCGATGCAGTTCGAATGCTCTCTCAGCTACGAGAAGAGTCTCAGAAGCTTAGAGAGTCCAACGAGAATTTGCTGAACAAAATAAATGAATTAAAGGCTGAGAAAAATGAGCTCCGGGATGAGAAACAGCTACTAAAATCGGAGAAAGATGACATTGAGCGGAAAGTTAAAGCCTTGAATTCACAACCAAGCTTCCTGCCTCACCCTCCCACCCTCACGGCAGCTCCATTTCCGGGGCCAGGACAAGTTATTGGAAGCAAGATGGTGCCATTCATCGGTTACCCAGGAGTTTCAATGTGGCAGTTCTTACCCCCTGCTTCTGTCGACACATCACAGGACCATGTACTTCGTCCCCCAGTCGCCTAA 771 0.4851 MSGTPSHMSSSENPTWVFDYGYLDDIPVPGGDLPSLEPPSFAWPSHSLTAPPADFSVELDDTYGNSDGLKEPGSRKRLRSGSGNSSDSKACREKLRRDRLNDRHLRIFHPLSMFLELGSVLDPGRPAKADKAVILSDAVRMLSQLREESQKLRESNENLLNKINELKAEKNELRDEKQLLKSEKDDIERKVKALNSQPSFLPHPPTLTAAPFPGPGQVIGSKMVPFIGYPGVSMWQFLPPASVDTSQDHVLRPPVA 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1841 256 Coils Coil 135 197 - -
Lele15g1841 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 83 159 IPR036638 GO:0046983
Lele15g1841 256 SMART finulus 90 151 IPR011598 GO:0046983
Lele15g1841 256 CDD bHLH_AtILR3_like 89 174 - -
Lele15g1841 256 PANTHER BHLH TRANSCRIPTION FACTOR 10 256 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Lele15g1841 256 MobiDBLite consensus disorder prediction 54 92 - -
Lele15g1841 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 84 145 IPR011598 GO:0046983
Lele15g1841 256 Gene3D - 85 172 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1841 Lele-ChrLele15 11229189 11231670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1841 8 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 52.549 5.86e-87 256