Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1831 ATGGGAAGGTCTGGAATTTCTTCAGGCTTCCGTTTCGTGGCTCGGGGACTAATTTTGCTAATACCACGCAGTCTACTACCACCGTCCACCATCACCATAATCCTCCTCCTATTGAGGGTTCAACGTCTCTTGGCTCCAATTCGGTTTCTTCGGTTGCGAGTCATGGACACATACATGAGCGCACATGAAGATCTATTCATTTTATGCATGTATGAACCTGGCAAGCAGGTTAGGAGCGCCATAAAGATTAAAAACACTACAAAGTCTCATGTAGCTTTCAAGTTTCAGACAACTGCACCCAAGAGCTGTTTCATGCGTCCTCCTGGAGCTATTCTTGCACCTGGTGAAAGTATCATAGCAACTGTGTTCAAGTTTGTTGAGCCTCCAGAAAATAATGAAAAGCCAGAGAAGAGCAGACTGAAATTTAAAATAATGAGCTTGAAGGTCAAAGGAGCAATTGATTACATTCCTGAGATGTTTGACGAGCAAAAGGACCAAGTAGCAGTAGAGCAGGTTCTGCGCGTTGTTTTTTTAGATCCTGAGCGTCCTAGTCCAGCTTTGGAAAAGCTGAAGCGACAGTTGGCTGATGCTGATGCTGTGCTCGAGGCACGGAAGAAACCTCCGGAAGATGCTGGTGCTAAGATTATTGGGGAAGGACTTGTCATTGATGAATGGAGAGAGAGATCTTTTAGTGAGGCGCCTCCTTTTGTAGAAAAGGTGTTTTCAGGTGAAAAGAGTGATAAGAAAACTGGAAAGCTGTGGACTGTGGTGAGAAGTGATCATTCTCTGTAG 792 0.447 MGRSGISSGFRFVARGLILLIPRSLLPPSTITIILLLLRVQRLLAPIRFLRLRVMDTYMSAHEDLFILCMYEPGKQVRSAIKIKNTTKSHVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEPPENNEKPEKSRLKFKIMSLKVKGAIDYIPEMFDEQKDQVAVEQVLRVVFLDPERPSPALEKLKRQLADADAVLEARKKPPEDAGAKIIGEGLVIDEWRERSFSEAPPFVEKVFSGEKSDKKTGKLWTVVRSDHSL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1831 263 ProSiteProfiles Major sperm protein (MSP) domain profile. 51 178 IPR000535 -
Lele15g1831 263 Pfam MSP (Major sperm protein) domain 71 167 IPR000535 -
Lele15g1831 263 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 73 224 IPR016763 GO:0005789
Lele15g1831 263 SUPERFAMILY PapD-like 70 188 IPR008962 -
Lele15g1831 263 Gene3D Immunoglobulins 57 182 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1831 Lele-ChrLele15 11188386 11191536 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1831 15 11188386 11191536 Lele13g0671 13 18803658 18805400 CCT
Lele15g1831 15 11188386 11191536 Lele14g0570 14 17220597 17222342 CCT
Lele15g1831 15 11188386 11191536 Lele15g1813 15 11035205 11036944 CCT
Lele15g1831 15 11188386 11191536 Lele16g1842 16 10981457 10983430 CCT
Lele15g1831 15 11188386 11191536 Lele15g1831 15 11188386 11191536 ECH