Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1819 ATGGATCATAGCTCCCGCACTGTTCCATTCTCTCTGCTCTCCTTCTTCATCCTCTGTTTTCTTGCTCTGTTTTCCCATGCAGCCATTTTCAATTCAATCACTCACGGCCAGTTCATCAGAGACGGCGACAGACTCGTATCACATGGGCTCAATTTCGAGTTGGGTTTCTTCGGCTCCCAAGATTCCCGGCTGCGTTACGTCGGAATTTGGTACGACCTCCCTGGACGGCCGGTGATATGGGTAGCCAACAGAGAAAACCCCATTAAAGACACAGAAGGAGCTATAACAATTAGCAACAACGGCAACTTGGTCATCTTCGACGGGCGAAATAACACAGTCTGGTCCAGTAACGTGCCAATCTCTTTCCCGATAAACAAAGAGCAGGCTATTCTCGGGGACGACGGAAATCTCATTCTTTCGAGCAGCCTTAGTAACAGAAAGTTATGGCAGAGCTTTGATCATCCAACAGATACATTTCTCCCAGGCATGATTGTGCCAGTATATGAAACAATGGGAGAGGTACATACTTGTTTATCTTGGAAATCTTCTGATAATCCTTCACCAGGGAACTACACAATGGGACTTGATCCTCGTGGAGCACTGCAGATAGTGATCTGGGAAGGAAGAAGAAGGAGATGGAGAAGTGGGTACTGGGATGGAAGTATATTTACAGGTATATCAAACATGAAAAGCAGTTATCTTTATGGTTTTAGGCTCAACGTGAATGATGACAGAACAAGGTACTTAACATATAATCCATTGAACAGTTCTGTCAAGGTAAGGTTTCAGATAGGTTGGGATGGGAATGAAAGGAAGCTCAGTTGGGATGAAGGTAAGAGAAAGTGGATTATTGTGGAAAGTGAGCCTTATAATGATTGTGAATTGTATAACAAGTGTGGGAATTTTGGGGTATGTTGTTTATCCACTTCACCTATATGTAATTGCTTGAAGGGGTTTGAGCCAAAGGATTGGGATCAATGGCAGAAAGGGAATTGGTCAGGTGGGTGTAAAAGGAGAACCCCGTTAAAGCATGAGATAAAAGAAGCTAGTAATAATGGAACAACAGAGGAAAATGTTGCAGAAGATGGATTCTTTACGATTAAGTGTATGAAATTGCCTGATTTTGTAAATTTGGTGGCTGATAGTAGTAACTCTGGTTTTGGTATCAACAAAGAGAATTGTGTGAATCATTGTGTTTCTAACATTACTTGCACTGCTTATGCTTATGTTCTTGGAATTGGATGCATGATTTGGCATGGGGAGTTAATTGATATTGACCACTTGGGAAATGGAGAAAACATGTTGTCCATCCGCCTTGCTGCTTCTGAATTAGGTAATGTGAGTAAAAAGACTACGGTAGTGATAATAGCAGCAGTTTTGGCAGGAGTAATCTGCCTAGGGTTCTGCGTGTGGCTAGCATTTATATTTCAAAGAAAACGCAAAGCTTCAGGAGGTACGATGAATGATGATGTACCTATGTTTGTTAAGAATAAGGGTAGAGAGTCTTCAGTGGATGTTTCTGGATCAGCTGAGTTTAGTTTGGAAGGGAACGAACTAAGTGGGCCAGAATTACCATTTTTCAATTTCAATTGCATTGCAATAGCCACAGACAATTTCTCAGAAGAGAACAAACTTGGAGAAGGTGGATTTGGTCCTGTCTACAAGGGAAAGCTTCGAGGCAGAGAAGAAATAGCAGTCAAGAGACTTTCAAGATGTTCAGGCCAAGGATTAGAGGAGTTCAAGAATGAGATGGTACTGATAGCCAAACTACAACATAGAAATTTAGTTAGGCTATTGGGATGTTCCATCGAAGAGGAAGAGAAGTTACTGATATATGAATACTTGCCAAACAAAAGCTTGGAATGTTATTTATTTGGAAACCAAAATGAAGCCAATACGAATAGAGTAGTTGGCACATATGGTTATATGGCACCAGAATATGCAATGAATGGTCTATTTTCAGTGAAATCCGACGTTTATAGTTTTGGGATATTACTGCTAGAGATTGTCAGTGGTCGTAAGAACACAAGTTTCCGTAACAAAGATGGCTCAAGTCTCATAGGACATGCATGGCATGTTTGGAACGAAGGGAGAGGGATGGAGATGGTGGACCCCACAATCCGAGATTCGGCGCCGATAAGCAAAGCATTGAGATGGATACAGATAGGGATGTTGTGTGTGCAGGATTCAGCAGGTCAGAGACCAAGCATGTCGAATGTTGTTCTGATGTTGGAGAGTGAAACAATGGCTCTTCCATGTCCAAGACAACCTCTGGTGATCTGCATGAGTTCTGAGGATAAACATGTTCATCTGGAAGAGCCGCTTGATGCTTCCTCAGAAGGTTTGACTATTACAGTGGCTCTTGGCAGATAG 2373 0.4214 MDHSSRTVPFSLLSFFILCFLALFSHAAIFNSITHGQFIRDGDRLVSHGLNFELGFFGSQDSRLRYVGIWYDLPGRPVIWVANRENPIKDTEGAITISNNGNLVIFDGRNNTVWSSNVPISFPINKEQAILGDDGNLILSSSLSNRKLWQSFDHPTDTFLPGMIVPVYETMGEVHTCLSWKSSDNPSPGNYTMGLDPRGALQIVIWEGRRRRWRSGYWDGSIFTGISNMKSSYLYGFRLNVNDDRTRYLTYNPLNSSVKVRFQIGWDGNERKLSWDEGKRKWIIVESEPYNDCELYNKCGNFGVCCLSTSPICNCLKGFEPKDWDQWQKGNWSGGCKRRTPLKHEIKEASNNGTTEENVAEDGFFTIKCMKLPDFVNLVADSSNSGFGINKENCVNHCVSNITCTAYAYVLGIGCMIWHGELIDIDHLGNGENMLSIRLAASELGNVSKKTTVVIIAAVLAGVICLGFCVWLAFIFQRKRKASGGTMNDDVPMFVKNKGRESSVDVSGSAEFSLEGNELSGPELPFFNFNCIAIATDNFSEENKLGEGGFGPVYKGKLRGREEIAVKRLSRCSGQGLEEFKNEMVLIAKLQHRNLVRLLGCSIEEEEKLLIYEYLPNKSLECYLFGNQNEANTNRVVGTYGYMAPEYAMNGLFSVKSDVYSFGILLLEIVSGRKNTSFRNKDGSSLIGHAWHVWNEGRGMEMVDPTIRDSAPISKALRWIQIGMLCVQDSAGQRPSMSNVVLMLESETMALPCPRQPLVICMSSEDKHVHLEEPLDASSEGLTITVALGR 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1819 790 Gene3D - 26 153 IPR036426 -
Lele15g1819 790 SMART blect_4 36 155 IPR001480 -
Lele15g1819 790 SUPERFAMILY Protein kinase-like (PK-like) 529 762 IPR011009 -
Lele15g1819 790 Pfam Protein tyrosine and serine/threonine kinase 542 636 IPR001245 GO:0004672|GO:0006468
Lele15g1819 790 Pfam Protein tyrosine and serine/threonine kinase 638 742 IPR001245 GO:0004672|GO:0006468
Lele15g1819 790 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 736 - -
Lele15g1819 790 PIRSF SRK 625 790 IPR024171 GO:0004674
Lele15g1819 790 PIRSF SRK 3 630 IPR024171 GO:0004674
Lele15g1819 790 Gene3D Phosphorylase Kinase; domain 1 515 614 - -
Lele15g1819 790 Gene3D Transferase(Phosphotransferase) domain 1 615 751 - -
Lele15g1819 790 Pfam D-mannose binding lectin 78 181 IPR001480 -
Lele15g1819 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 625 749 - -
Lele15g1819 790 CDD B_lectin 37 155 IPR001480 -
Lele15g1819 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 152 - -
Lele15g1819 790 ProSiteProfiles Bulb-type lectin domain profile. 30 152 IPR001480 -
Lele15g1819 790 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Lele15g1819 790 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 220 IPR036426 -
Lele15g1819 790 Pfam PAN-like domain 360 425 IPR003609 -
Lele15g1819 790 SMART ntp_6 359 439 IPR003609 -
Lele15g1819 790 ProSiteProfiles Protein kinase domain profile. 539 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1819 790 ProSiteProfiles PAN/Apple domain profile. 359 441 IPR003609 -
Lele15g1819 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 505 614 - -
Lele15g1819 790 CDD PAN_AP_plant 356 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1819 Lele-ChrLele15 11094421 11097795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1819 468 778 Receptor kinase-like Gene Family AT4G23280 38.182 7.22e-55 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele15g1819 PK_Tyr_Ser-Thr 7.7e-10 CL0016