Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1802 ATGGTTATAGGATGTAGGGTACTCGCAACATTGTTGTGCAGTGTAGAGAAATTCAGTTCTGTAATCAGCATATCGCTTTTTTACTCTGGGTTGGAACTCCTATTTGATAACTTGGCTATTCTTTCTTCCCGACTGTATTGCAACCCAATTAACCTGTGTGAACTTAGATACAAGATTATCGTTTATGGTGACGTGTTAAAAGTTTTCCTTGCTAAGTACGGAAAGCAATGGGATGGAAGGGAAGCTCATAAGATTGTAGGAAAGGCGCCACTTGAATGTTCTGCTGCAATAGTGGAAGATTATGGTCTTCCTTGCTCAGCAAGTGAATTTCTTTGTGGAATTCAACCAATTTTTTCTGATCAGTATGTAGATGTTATTCCACTGTTTCTATGCATTTCATTCTTGGACCAGAGATATGATATCATGTGGGGCAATATCAAAGCACTTCCTGGTGCCAATGGACTGATTAAACATTTGAAGAAACATGGTGTTCCAATGGCCTTGGCATCAAACTCTCTAAGGGAAAGCGTAGAAGACAAAATATCTTACCATGATGGATGGAAAAATTCTTTCTCTGTTATAATTTGTGGAGATGAAGTCAGAACTGGGAAACCTTCTCCTGAAATACCTGGTGTTACTGCAGGTAAAGCTGCTGGAATGGAAGTAATTGCTGTACCATCACTTCCTAAACAGTCCCATCTCTATACTGCTGCAGATGAGGTCATCAATTCCCTACTTGATTTGCACCTTGAGAAGTGGGGTCTGCCTCCGTTCGAAGATTGGGTGGAAGGTACTTTGCCAATAGATCCTTGGTGTATTGGTGGTCCTGTTATCAAGGGATTTGGTCGTGGCTCAAAGGTATTGGGGATCCCTACAGCTAATTTGTCAGCTGAAGGCTATTCAGATCTCCTTACGCTACATCCTGCGGGTGTTTATTTTGGTTGGGCTGGATTATCTGGAAGAGGGGTTTATAAAATGGTCATGAGCATAGGCTGGAACCCATATTTCGACAACAAGGAAAAGACCATAGAACCCTGGTTACTTCATGAATTTAATGAGGATTTCTATGGGGAAGAACTGTGTCTTGTCGTCGTTGGTTATATACGTCCTGAGGTAATTTCAACGTTCTTCTTGCGATTGCTTGTCCTGAGTCCTGCTTTCATTGTTTCACTGAACTCAAAAAATGATGAATGA 1194 0.4121 MVIGCRVLATLLCSVEKFSSVISISLFYSGLELLFDNLAILSSRLYCNPINLCELRYKIIVYGDVLKVFLAKYGKQWDGREAHKIVGKAPLECSAAIVEDYGLPCSASEFLCGIQPIFSDQYVDVIPLFLCISFLDQRYDIMWGNIKALPGANGLIKHLKKHGVPMALASNSLRESVEDKISYHDGWKNSFSVIICGDEVRTGKPSPEIPGVTAGKAAGMEVIAVPSLPKQSHLYTAADEVINSLLDLHLEKWGLPPFEDWVEGTLPIDPWCIGGPVIKGFGRGSKVLGIPTANLSAEGYSDLLTLHPAGVYFGWAGLSGRGVYKMVMSIGWNPYFDNKEKTIEPWLLHEFNEDFYGEELCLVVVGYIRPEVISTFFLRLLVLSPAFIVSLNSKNDE 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1802 397 Gene3D - 210 254 IPR023214 -
Lele15g1802 397 Gene3D - 130 209 IPR023214 -
Lele15g1802 397 SUPERFAMILY HAD-like 64 249 IPR036412 -
Lele15g1802 397 Gene3D Putative phosphatase; domain 2 60 122 IPR023198 -
Lele15g1802 397 SUPERFAMILY Riboflavin kinase-like 270 372 IPR023465 GO:0008531|GO:0009231
Lele15g1802 397 Pfam Riboflavin kinase 270 371 IPR015865 GO:0008531|GO:0009231
Lele15g1802 397 SMART Flavokinase_2 266 378 IPR015865 GO:0008531|GO:0009231
Lele15g1802 397 FunFam Haloacid dehalogenase-like hydrolase domain-containing protein 1A 259 380 - -
Lele15g1802 397 Pfam Haloacid dehalogenase-like hydrolase 145 209 IPR041492 -
Lele15g1802 397 Gene3D - 259 375 IPR023465 GO:0008531|GO:0009231
Lele15g1802 397 PANTHER RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE 65 371 IPR023468 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1802 Lele-ChrLele15 10944195 10948718 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1802 15 10944195 10948718 Lele13g0686 13 18921019 18925043 CCT
Lele15g1802 15 10944195 10948718 Lele14g0585 14 17326423 17331179 CCT
Lele15g1802 15 10944195 10948718 Lele15g1798 15 10901937 10905949 CCT
Lele15g1802 15 10944195 10948718 Lele16g2071 16 12996705 12997517 CCT