Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1798 ATGCAGACCAGATATTTGGAGAGATCGGGTAGTATGGCCAGAGAAAAGCGACGCCTGGATTCCACTTCGGCTGAGGAAGATCAGCCTGATAGGAAGCGGCCGGCTTTAGCTAGTGTAATTATTGAAGCCCTCAAAGTGGACAGTCTGCAGAAACTCTGCTCATCACTGGAGCCAATTCTACGGAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTAGCAAAATTAGGTCCTGCCAAGCTAACTGGGAGGACATCTCCTAAACGTATAGAAGGTCCTGATGGCAGAAATTTACAGTTGCACTTTAAGACCAGGCTATCCCTTCCCCTCTTTACTGGAGGGAAAGTGGAGGGGGAACAAGGTGCCGCCATTCATGTTGTTTTGACTGATGGAAGCACTGGCCATGTTGTCACATCTGGCCCAGAGTCCTCTGTGAGACTAGATGTTATTGTGCTTGAAGGGGATTTCAACAATGAGGATGATGATAATTGGAGTGAAGAAGAATTTGAGAGCCATGTCGTGAAGGAGAGGGAAGGAAAAAGGCCTCTTCTAACTGGCGATTTGCAAGTCACTCTAAAAGAGGGTGTAGGAACACTAGGTGAGCTCACATTTACTGACAATTCTAGCTGGATAAGGAGTAGGAAATTCAGGCTGGGGCTCAGAGTTGCCTCGGGTTGCTGTGAGGGAATCCGTATTCGTGAAGCCAAAACAGAAGCCTTCACTGTTAAAGATCACCGTGGAGAATTATACAAGAAACACTATCCACCTGCCTTGAATGATGAGGTCTGGAGGCTGGAGAAGATTGGAAAGGATGGATCTTTTCACAGGAGGCTAAACAAAGCAGGAATATTCACTGTTGAAGACTTCCTACGACTTGTGGTCAGAGATCATCAGAGGTTGCGAAATATTCTTGGGAGTGGCATGTCTAATAAAATGTGGGAGGTTCTTGTTGAGCATGCGAAGACTTGTGTTCTTAGTGGAAAGCTTTATGTATACTATGCCGAAGATGCAAGGAATGTTGGTGTTGTTTTTAACAACATATATGAGTTGAGTGGCTTAATTACTAGTGGACAGTATTATTCAGCCGATTATCTCTCTGAAAGTCAAAAGGTTTATGTGGACACGTTGGTGAAGAAGGCATATGACAATTGGATGCATGTTGTAGAGTATGATGGACAGTCTCTGATAAATTACAATCAGAATAAGACTTTGGGTAATTCTCAACCTCAGCTTCCAGTGGGCTCCCATGATTATTCAAACTCACTTGATCCGCAGATCTCCATCCCAAGTTTGCATGTTCCAGTACCTGCAGAGCAGCCTGCTATGGATTCAGGAGTAGCTGTTGGAGGTTATCATGGTGCTCCCGCTGCCAGATTTTCAATGCCCCCACAGCATGCTGATCTTAATTCTTCAATTCAGTTTGATAGTACTGACATGCAACTACAAAACCAGTTGATGAGTTCTTCAGACCAACCTCAACTTGCAAGAAATGAGGATGGGCTGACTCTTGGTCCGCCTCAGTCAGCTACACCAGGATTTCAGAATGTCAGCATGTCAAATCCTTCTTATAGAGGCCTTGAAGACTTATTCCCTGAGGAGGAGATTCGTATTAGAAGCCATGAAATGCTAGAAAATGAAGATATGCAGCATCTGCTCCATATTTTTAACATGGGAGGTCAAGCTCATACTCCCTTTAATGCTCCTGAATATGGATACCCTGGTACATCTGCTTACTTGCCAACTTCCCCCATGAACTATAACCTTGACGATGATCGAAACCGCTCCTCAGGGAAAGCTGTTGTGGGCTGGCTCAAGCTCAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAATAAGGCTGCTGAAAGACGGGCCCAACTTGTTGAGTTGGATGATTCATAG 1899 0.4492 MQTRYLERSGSMAREKRRLDSTSAEEDQPDRKRPALASVIIEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLTGRTSPKRIEGPDGRNLQLHFKTRLSLPLFTGGKVEGEQGAAIHVVLTDGSTGHVVTSGPESSVRLDVIVLEGDFNNEDDDNWSEEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLRVASGCCEGIRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHRRLNKAGIFTVEDFLRLVVRDHQRLRNILGSGMSNKMWEVLVEHAKTCVLSGKLYVYYAEDARNVGVVFNNIYELSGLITSGQYYSADYLSESQKVYVDTLVKKAYDNWMHVVEYDGQSLINYNQNKTLGNSQPQLPVGSHDYSNSLDPQISIPSLHVPVPAEQPAMDSGVAVGGYHGAPAARFSMPPQHADLNSSIQFDSTDMQLQNQLMSSSDQPQLARNEDGLTLGPPQSATPGFQNVSMSNPSYRGLEDLFPEEEIRIRSHEMLENEDMQHLLHIFNMGGQAHTPFNAPEYGYPGTSAYLPTSPMNYNLDDDRNRSSGKAVVGWLKLKAALRWGIFIRNKAAERRAQLVELDDS 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1798 632 MobiDBLite consensus disorder prediction 9 32 - -
Lele15g1798 632 MobiDBLite consensus disorder prediction 1 32 - -
Lele15g1798 632 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
Lele15g1798 632 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
Lele15g1798 632 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Lele15g1798 632 PANTHER OS02G0177800 PROTEIN 13 547 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1798 Lele-ChrLele15 10901937 10905949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1798 11 627 Calmodulin-binding Proteins AT5G57580 63.438 0.0 785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1802 15 10944195 10948718 Lele15g1798 15 10901937 10905949 CCT
Lele16g1831 16 10900682 10907356 Lele15g1798 15 10901937 10905949 CCT
Lele13g0686 13 18921019 18925043 Lele15g1798 15 10901937 10905949 hybridization
Lele14g0585 14 17326423 17331179 Lele15g1798 15 10901937 10905949 hybridization