Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1794 ATGGCCACTGTTGGGTCTTCTTCTTCCTCGTCAAAGGTCTGCTACAATTCGGACTGCAAAGAATTGAAGTCAGACAGACCTAAGAGGGGTTGGAGACTCCGTACTGGAGACTTCGCTGAGCTCTGTGATCGATGCGGTTCTGCTTTTGAGGAAGGAAGGTTCTGTGAAGTTTATCACTCAAAAGCTTCTGGTTGGAGGACTTGTGAGTCATGTGGGAAGGGGATTCATTGCGGGTGTATTGTTTCAAGTACAGCCTTTATGTTGTTGGATCCTGGAGGCATTGAATGCATTCCATGCGCCAGGAAGAATATTATTTTGTCATCTAGTCTGCCTTGGACACCACCTGTTTCTCTTCAAGCTCGTTTTAGAGAGCTGACCTCAAAAAATTGGAGTCAGTTAGCTGGATCAGGTCCTGTGCCGTGGAAGCAAGCACCCACTCTGTTCAATACGACTTCTTCATCTGACCGGCACCCAGATGTGCCATCTGTAGTTGAAATATCTAGTGTTGACAATATTTATGGAAATGAAAGGATAGCCGCCTCGTCTCTGGAAAAGAAAAGTGATGATCTTTCTGGAATACCGGCTAATTGGAATGTAAAGATTGGTGCACGGGAAATGATGTTTATAAATGGAATGCGGAATGATGAAAAGTCTAGTTCATGCTTGAATATGTGCCAGCAACCTTCTCTTAAGGAGGATTCATCGACCCAACCATTTGGTCTGACTGTACCATATGCACATCAAAATGAAAGAAATGGTCAAATTGGGGTAACTGGAAGTCATCCACAACAAACTCCACCTCCTCACGGAAAGCAATTTAGTGGCCCTGTACATGTTGCGCTTGATTCATCTGGTGAATCACAGGCACGAAACGGACGGCCTAGAGCAGATGCCCGAGGAAGGAACCAGTTACTGCCACGGTACTGGCCCAGGTGCATTGATCAGGAGCTACATCAAATCTCTCTTGACTCTAATTCTGTTATAACTCCATTGTTCCAAAAAACGTTGAGCGCTAGTGATGCTGGGCGAATTGGGCGTCTAGTGCTGCCCAAAAAATGTGCTGAGGCCTACTTTCCACCAATTTCTCAGCCTGAAGGGTTGCCACTTAAAATCCTTGATGCAAAAGGCAAGGAATGGATATTTCAATTTCGCTTTTGGCCCAACAATAATAGTAGAATGTATGTTTTAGAAGGCGTAACTCCATGCATACAGTCCATGCAATTGCAAGCTGGTGACACAGTAACATTTAGTCGGTTGGAGCCAGAGGGGAGGTTGGTTATGGGATTTCGAAAGGCTTCAAGTGCTACCCAATCTGATCAGGACAATGAGACAAGCAAGACTGGAAATGGATATTCTACACATGGTGAAGTTGAATTGGATCCTAGTTCATGGTCTAAAGTTGACAAATCAGGATATATAGCAAAAGAAGCACTGGGGAGCAAACCTTCCATTTCTAGGAAGAGAAAGAGTAGTGCTTTGGGTTCAAAGAGTAAGCGACTAAGAATTGAAAGTGAGGATCTAATAGAGTTGAATATTACTTGGGAAGAAGCTCAAGGCCTGCTCCGCCCCCCTCCTAACCATGTTCCCAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAGTATGAGGATGCTCCAGTGCTAGGGAAACCAACAATTTTCACTACCGATAGTGTTGGTGAAAAGATCCAGTGGGATCAATGTGAAGATTGTCAAAAATGGCGCAAATTGCCAGCTAATGCTCTTCTAACATCAAGATGGACATGTTCAGATAATCCATGGGACCCAGAAAGATCATGTTCGGCTGCGCAGGAGTTGACAGCAGAACAGCTTGAAGATTTGCTTCCCCCTTGTAATTCAGTTGTATCCAAGAAAATGAAGACCGCCAAGCAGGATCCTGATAATGTCGAAGCTTTGGAAGGACTTGACACTCTTGCGAACTTAGCTATCTTGGGAGAGGGGGAGGCTCTCCCAGCATCTGCCCAAGCCACAACAAAACACCCTCGGCATAGACCTGGCTGCTCTTGCATTGTTTGCATTCAGCCTCCTAGTGGGAAGGGGCCCAAGCATAAGCAGACTTGCACATGTAATGTTTGCTTAACAGTGAAGCGCCGTTTCCGTACCTTGATGTTACGGCGTGAGAAGAAACAATCAGAGAGAGAAGCAGAGACAACACGTAAAAAGCAGCAGCCCCAGCCACCACAGCCACCACCACCTATGTCAGAGATATTGCTTGACGATGATTCCCTGCCTTGCAGTAACACAGGAGATAATAGTAGTCCTAATCAGAACAGGGAGGGCAATGAAGGTTCTGATGATGACCCTAACAAGACAAAGTCATCCGCATCGCCATTTAAAGGCCAGATTGACCTCAATATTCAGCCAGAGCGAGAGGAAGAGTTGTCTCCCAGTTCAGATTCTGGAAGCATGATTAAGATGCTCCATAATGCTACAGAGAGGTATCCGAGGCAGCAGAATATGGCGAACTCTTTTGCCGGAGATACTTCAGGTGGACAGTCGCAGCAAGTTGGAGACGACGCGATGGAAGAGAAACTTTGCAATGGGGTAGCCCTTGGCAGTAGTGATCATAATTCTGACAAGGAACGGGCCCAAACATTGCCCATGAATGTGTGA 2634 0.4579 MATVGSSSSSSKVCYNSDCKELKSDRPKRGWRLRTGDFAELCDRCGSAFEEGRFCEVYHSKASGWRTCESCGKGIHCGCIVSSTAFMLLDPGGIECIPCARKNIILSSSLPWTPPVSLQARFRELTSKNWSQLAGSGPVPWKQAPTLFNTTSSSDRHPDVPSVVEISSVDNIYGNERIAASSLEKKSDDLSGIPANWNVKIGAREMMFINGMRNDEKSSSCLNMCQQPSLKEDSSTQPFGLTVPYAHQNERNGQIGVTGSHPQQTPPPHGKQFSGPVHVALDSSGESQARNGRPRADARGRNQLLPRYWPRCIDQELHQISLDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKASSATQSDQDNETSKTGNGYSTHGEVELDPSSWSKVDKSGYIAKEALGSKPSISRKRKSSALGSKSKRLRIESEDLIELNITWEEAQGLLRPPPNHVPSIVVIEGFEFEEYEDAPVLGKPTIFTTDSVGEKIQWDQCEDCQKWRKLPANALLTSRWTCSDNPWDPERSCSAAQELTAEQLEDLLPPCNSVVSKKMKTAKQDPDNVEALEGLDTLANLAILGEGEALPASAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEREAETTRKKQQPQPPQPPPPMSEILLDDDSLPCSNTGDNSSPNQNREGNEGSDDDPNKTKSSASPFKGQIDLNIQPEREEELSPSSDSGSMIKMLHNATERYPRQQNMANSFAGDTSGGQSQQVGDDAMEEKLCNGVALGSSDHNSDKERAQTLPMNV 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1794 877 MobiDBLite consensus disorder prediction 252 270 - -
Lele15g1794 877 Gene3D - 310 437 IPR015300 -
Lele15g1794 877 Pfam CW-type Zinc Finger 565 605 IPR011124 GO:0008270
Lele15g1794 877 CDD B3_DNA 330 431 IPR003340 GO:0003677
Lele15g1794 877 MobiDBLite consensus disorder prediction 751 766 - -
Lele15g1794 877 FunFam B3 domain-containing transcription repressor VAL1 310 437 - -
Lele15g1794 877 ProSiteProfiles B3 DNA-binding domain profile. 332 433 IPR003340 GO:0003677
Lele15g1794 877 MobiDBLite consensus disorder prediction 430 463 - -
Lele15g1794 877 MobiDBLite consensus disorder prediction 856 877 - -
Lele15g1794 877 ProSiteProfiles Zinc finger CW-type profile. 559 608 IPR011124 GO:0008270
Lele15g1794 877 SMART B3_2 332 433 IPR003340 GO:0003677
Lele15g1794 877 Gene3D - 554 610 - -
Lele15g1794 877 MobiDBLite consensus disorder prediction 431 459 - -
Lele15g1794 877 MobiDBLite consensus disorder prediction 711 809 - -
Lele15g1794 877 MobiDBLite consensus disorder prediction 252 279 - -
Lele15g1794 877 MobiDBLite consensus disorder prediction 712 727 - -
Lele15g1794 877 SUPERFAMILY DNA-binding pseudobarrel domain 329 432 IPR015300 -
Lele15g1794 877 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 11 837 - -
Lele15g1794 877 Pfam B3 DNA binding domain 332 431 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1794 Lele-ChrLele15 10865001 10874824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1794 10 716 B3 DNA Binding Superfamily AT4G32010 46.389 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele15g1794 B3 9.6e-16 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1794 15 10865001 10874824 Lele13g0671 13 18803658 18805400 CCT
Lele15g1794 15 10865001 10874824 Lele14g0570 14 17220597 17222342 CCT
Lele15g1794 15 10865001 10874824 Lele15g1813 15 11035205 11036944 CCT
Lele15g1794 15 10865001 10874824 Lele16g1842 16 10981457 10983430 CCT
Lele15g1794 15 10865001 10874824 Lele15g1794 15 10865001 10874824 ECH
Lele13g0689 13 18953127 18968110 Lele15g1794 15 10865001 10874824 hybridization
Lele14g0588 14 17359667 17369268 Lele15g1794 15 10865001 10874824 hybridization